Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Krt88Q9CPR6 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt88Q9CPR6 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Krt88Q9CPR6 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt88Q9CPR6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Krt88Q9CPR6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.63□□□□□ -0.23
Krt88Q9CPR6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.63□□□□□ -0.23
Krt88Q9CPR6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Krt88Q9CPR6 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.63□□□□□ -0.23
Krt88Q9CPR6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt88Q9CPR6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt88Q9CPR6 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt88Q9CPR6 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt88Q9CPR6 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt88Q9CPR6 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt88Q9CPR6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Krt88Q9CPR6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt88Q9CPR6 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt88Q9CPR6 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Krt88Q9CPR6 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt88Q9CPR6 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Krt88Q9CPR6 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt88Q9CPR6 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.62□□□□□ -0.23
Krt88Q9CPR6 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Gm10231-201ENSMUST00000181584 441 ntBASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Gm10175-202ENSMUST00000208752 441 ntBASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Gm19164-201ENSMUST00000210667 640 ntBASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Krt88Q9CPR6 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Krt88Q9CPR6 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Krt88Q9CPR6 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.6□□□□□ -0.23
Krt88Q9CPR6 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Krt88Q9CPR6 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Krt88Q9CPR6 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.6□□□□□ -0.23
Krt88Q9CPR6 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Krt88Q9CPR6 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Krt88Q9CPR6 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Krt88Q9CPR6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Krt88Q9CPR6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms