Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha3Q91Y16 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha3Q91Y16 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha3Q91Y16 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha3Q91Y16 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha3Q91Y16 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Pcdha3Q91Y16 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdha3Q91Y16 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pcdha3Q91Y16 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha3Q91Y16 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdha3Q91Y16 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdha3Q91Y16 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha3Q91Y16 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdha3Q91Y16 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.75■□□□□ 0.11
Pcdha3Q91Y16 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Gm9727-201ENSMUST00000161387 555 ntBASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Gm4899-201ENSMUST00000178708 719 ntBASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Gm8000-201ENSMUST00000188378 592 ntBASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha3Q91Y16 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha3Q91Y16 Efs-202ENSMUST00000227037 2540 ntBASIC15.73■□□□□ 0.11
Pcdha3Q91Y16 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdha3Q91Y16 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdha3Q91Y16 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha3Q91Y16 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.73■□□□□ 0.11
Pcdha3Q91Y16 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Pcdha3Q91Y16 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha3Q91Y16 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha3Q91Y16 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha3Q91Y16 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Pcdha3Q91Y16 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.73■□□□□ 0.11
Pcdha3Q91Y16 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha3Q91Y16 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.73■□□□□ 0.11
Pcdha3Q91Y16 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha3Q91Y16 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha3Q91Y16 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdha3Q91Y16 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha3Q91Y16 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms