Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb4Q91XZ6 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb4Q91XZ6 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb4Q91XZ6 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb4Q91XZ6 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb4Q91XZ6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb4Q91XZ6 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb4Q91XZ6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb4Q91XZ6 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb4Q91XZ6 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Pcdhb4Q91XZ6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Gm21362-201ENSMUST00000194272 928 ntBASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhb4Q91XZ6 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Gm15358-201ENSMUST00000119249 520 ntBASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb4Q91XZ6 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Gm28033-201ENSMUST00000184224 96 ntBASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb4Q91XZ6 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms