Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Gm18889-201ENSMUST00000174284 929 ntBASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Gm19164-201ENSMUST00000210667 640 ntBASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgc5Q91XW9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Gm43125-201ENSMUST00000201724 730 ntBASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Thap2-203ENSMUST00000218989 527 ntBASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc5Q91XW9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc5Q91XW9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc5Q91XW9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc5Q91XW9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc5Q91XW9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc5Q91XW9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc5Q91XW9 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc5Q91XW9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Pcdhgc5Q91XW9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc5Q91XW9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc5Q91XW9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc5Q91XW9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc5Q91XW9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc5Q91XW9 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc5Q91XW9 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.16■□□□□ 0.34
Pcdhgc5Q91XW9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc5Q91XW9 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdhgc5Q91XW9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc5Q91XW9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc5Q91XW9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhgc5Q91XW9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc5Q91XW9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Pcdhgc5Q91XW9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc5Q91XW9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 Gm22175-201ENSMUST00000175007 78 ntBASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 Gm18246-201ENSMUST00000221023 728 ntBASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhgc5Q91XW9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms