Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HnrnpuQ8VEK3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HnrnpuQ8VEK3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HnrnpuQ8VEK3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HnrnpuQ8VEK3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HnrnpuQ8VEK3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HnrnpuQ8VEK3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HnrnpuQ8VEK3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HnrnpuQ8VEK3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HnrnpuQ8VEK3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HnrnpuQ8VEK3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC18.77■□□□□ 0.6
HnrnpuQ8VEK3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HnrnpuQ8VEK3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.77■□□□□ 0.6
HnrnpuQ8VEK3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HnrnpuQ8VEK3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HnrnpuQ8VEK3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.77■□□□□ 0.6
HnrnpuQ8VEK3 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.77■□□□□ 0.6
HnrnpuQ8VEK3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HnrnpuQ8VEK3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
HnrnpuQ8VEK3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
HnrnpuQ8VEK3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HnrnpuQ8VEK3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HnrnpuQ8VEK3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HnrnpuQ8VEK3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HnrnpuQ8VEK3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HnrnpuQ8VEK3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HnrnpuQ8VEK3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HnrnpuQ8VEK3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HnrnpuQ8VEK3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HnrnpuQ8VEK3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
HnrnpuQ8VEK3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HnrnpuQ8VEK3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HnrnpuQ8VEK3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.76■□□□□ 0.59
HnrnpuQ8VEK3 Gm4899-201ENSMUST00000178708 719 ntBASIC18.76■□□□□ 0.59
HnrnpuQ8VEK3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HnrnpuQ8VEK3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.76■□□□□ 0.59
HnrnpuQ8VEK3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HnrnpuQ8VEK3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HnrnpuQ8VEK3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HnrnpuQ8VEK3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HnrnpuQ8VEK3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HnrnpuQ8VEK3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
HnrnpuQ8VEK3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HnrnpuQ8VEK3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HnrnpuQ8VEK3 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Mir5131-201ENSMUST00000175426 93 ntBASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Mir5126-201ENSMUST00000175513 77 ntBASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HnrnpuQ8VEK3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HnrnpuQ8VEK3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HnrnpuQ8VEK3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HnrnpuQ8VEK3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
HnrnpuQ8VEK3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HnrnpuQ8VEK3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HnrnpuQ8VEK3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HnrnpuQ8VEK3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HnrnpuQ8VEK3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HnrnpuQ8VEK3 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HnrnpuQ8VEK3 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HnrnpuQ8VEK3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HnrnpuQ8VEK3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HnrnpuQ8VEK3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HnrnpuQ8VEK3 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.74■□□□□ 0.59
HnrnpuQ8VEK3 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.74■□□□□ 0.59
HnrnpuQ8VEK3 Gm18246-201ENSMUST00000221023 728 ntBASIC18.74■□□□□ 0.59
HnrnpuQ8VEK3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HnrnpuQ8VEK3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.74■□□□□ 0.59
HnrnpuQ8VEK3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HnrnpuQ8VEK3 Gm38058-201ENSMUST00000194323 4368 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms