Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afjQ8R1M2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afjQ8R1M2 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afjQ8R1M2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H2afjQ8R1M2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afjQ8R1M2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afjQ8R1M2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afjQ8R1M2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afjQ8R1M2 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
H2afjQ8R1M2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
H2afjQ8R1M2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afjQ8R1M2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afjQ8R1M2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afjQ8R1M2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afjQ8R1M2 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.03□□□□□ -0.16
H2afjQ8R1M2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.03□□□□□ -0.16
H2afjQ8R1M2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H2afjQ8R1M2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
H2afjQ8R1M2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.03□□□□□ -0.16
H2afjQ8R1M2 Gm27867-201ENSMUST00000184778 125 ntBASIC14.03□□□□□ -0.16
H2afjQ8R1M2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.03□□□□□ -0.16
H2afjQ8R1M2 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.03□□□□□ -0.16
H2afjQ8R1M2 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.03□□□□□ -0.16
H2afjQ8R1M2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afjQ8R1M2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afjQ8R1M2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afjQ8R1M2 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.03□□□□□ -0.16
H2afjQ8R1M2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afjQ8R1M2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afjQ8R1M2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afjQ8R1M2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afjQ8R1M2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afjQ8R1M2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afjQ8R1M2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afjQ8R1M2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afjQ8R1M2 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H2afjQ8R1M2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
H2afjQ8R1M2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afjQ8R1M2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afjQ8R1M2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
H2afjQ8R1M2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afjQ8R1M2 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afjQ8R1M2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
H2afjQ8R1M2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.02□□□□□ -0.16
H2afjQ8R1M2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afjQ8R1M2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afjQ8R1M2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
H2afjQ8R1M2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afjQ8R1M2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.02□□□□□ -0.16
H2afjQ8R1M2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afjQ8R1M2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afjQ8R1M2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
H2afjQ8R1M2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afjQ8R1M2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.02□□□□□ -0.17
H2afjQ8R1M2 Gm19164-201ENSMUST00000210667 640 ntBASIC14.02□□□□□ -0.17
H2afjQ8R1M2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.02□□□□□ -0.17
H2afjQ8R1M2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.02□□□□□ -0.17
H2afjQ8R1M2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afjQ8R1M2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afjQ8R1M2 Gm7367-201ENSMUST00000057611 492 ntBASIC14.02□□□□□ -0.17
H2afjQ8R1M2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afjQ8R1M2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H2afjQ8R1M2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afjQ8R1M2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afjQ8R1M2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afjQ8R1M2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afjQ8R1M2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
H2afjQ8R1M2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H2afjQ8R1M2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afjQ8R1M2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H2afjQ8R1M2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afjQ8R1M2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
H2afjQ8R1M2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
H2afjQ8R1M2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
H2afjQ8R1M2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
H2afjQ8R1M2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.01□□□□□ -0.17
H2afjQ8R1M2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afjQ8R1M2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
H2afjQ8R1M2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afjQ8R1M2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afjQ8R1M2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afjQ8R1M2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
H2afjQ8R1M2 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afjQ8R1M2 Gm15372-201ENSMUST00000120729 834 ntBASIC14.01□□□□□ -0.17
H2afjQ8R1M2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afjQ8R1M2 Gm12497-201ENSMUST00000138778 237 ntBASIC14.01□□□□□ -0.17
H2afjQ8R1M2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
H2afjQ8R1M2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afjQ8R1M2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afjQ8R1M2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afjQ8R1M2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afjQ8R1M2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afjQ8R1M2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
H2afjQ8R1M2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afjQ8R1M2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afjQ8R1M2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afjQ8R1M2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afjQ8R1M2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afjQ8R1M2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H2afjQ8R1M2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms