Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc2Q8CG48 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc2Q8CG48 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc2Q8CG48 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc2Q8CG48 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Smc2Q8CG48 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smc2Q8CG48 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.28■□□□□ 0.36
Smc2Q8CG48 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Smc2Q8CG48 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc2Q8CG48 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Smc2Q8CG48 Gm10499-201ENSMUST00000174094 934 ntBASIC17.28■□□□□ 0.36
Smc2Q8CG48 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.28■□□□□ 0.36
Smc2Q8CG48 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.28■□□□□ 0.36
Smc2Q8CG48 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smc2Q8CG48 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc2Q8CG48 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Smc2Q8CG48 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc2Q8CG48 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc2Q8CG48 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc2Q8CG48 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc2Q8CG48 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Smc2Q8CG48 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc2Q8CG48 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smc2Q8CG48 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc2Q8CG48 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc2Q8CG48 Celf4-206ENSMUST00000224553 1729 ntBASIC17.27■□□□□ 0.36
Smc2Q8CG48 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc2Q8CG48 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smc2Q8CG48 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.27■□□□□ 0.36
Smc2Q8CG48 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc2Q8CG48 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc2Q8CG48 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc2Q8CG48 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smc2Q8CG48 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc2Q8CG48 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Smc2Q8CG48 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Smc2Q8CG48 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Smc2Q8CG48 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smc2Q8CG48 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Smc2Q8CG48 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc2Q8CG48 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc2Q8CG48 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc2Q8CG48 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc2Q8CG48 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Smc2Q8CG48 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smc2Q8CG48 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smc2Q8CG48 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smc2Q8CG48 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Smc2Q8CG48 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
Smc2Q8CG48 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.27■□□□□ 0.35
Smc2Q8CG48 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc2Q8CG48 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc2Q8CG48 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smc2Q8CG48 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Smc2Q8CG48 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Smc2Q8CG48 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc2Q8CG48 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.26■□□□□ 0.35
Smc2Q8CG48 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smc2Q8CG48 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smc2Q8CG48 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smc2Q8CG48 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.26■□□□□ 0.35
Smc2Q8CG48 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.26■□□□□ 0.35
Smc2Q8CG48 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.26■□□□□ 0.35
Smc2Q8CG48 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.26■□□□□ 0.35
Smc2Q8CG48 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc2Q8CG48 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc2Q8CG48 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smc2Q8CG48 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Smc2Q8CG48 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.26■□□□□ 0.35
Smc2Q8CG48 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc2Q8CG48 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc2Q8CG48 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Smc2Q8CG48 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc2Q8CG48 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc2Q8CG48 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc2Q8CG48 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc2Q8CG48 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc2Q8CG48 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc2Q8CG48 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Smc2Q8CG48 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Smc2Q8CG48 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc2Q8CG48 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smc2Q8CG48 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc2Q8CG48 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smc2Q8CG48 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Smc2Q8CG48 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc2Q8CG48 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smc2Q8CG48 Gm7153-201ENSMUST00000117092 455 ntBASIC17.25■□□□□ 0.35
Smc2Q8CG48 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smc2Q8CG48 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smc2Q8CG48 Gm7230-201ENSMUST00000173026 815 ntBASIC17.25■□□□□ 0.35
Smc2Q8CG48 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.25■□□□□ 0.35
Smc2Q8CG48 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.25■□□□□ 0.35
Smc2Q8CG48 Gm7787-201ENSMUST00000216858 688 ntBASIC17.25■□□□□ 0.35
Smc2Q8CG48 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.25■□□□□ 0.35
Smc2Q8CG48 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc2Q8CG48 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc2Q8CG48 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smc2Q8CG48 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.25■□□□□ 0.35
Smc2Q8CG48 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms