Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shisa4Q8CA71 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Mir6956-201ENSMUST00000183598 62 ntBASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
Shisa4Q8CA71 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa4Q8CA71 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa4Q8CA71 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.43■□□□□ 0.38
Shisa4Q8CA71 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa4Q8CA71 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Shisa4Q8CA71 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa4Q8CA71 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.43■□□□□ 0.38
Shisa4Q8CA71 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Shisa4Q8CA71 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.43■□□□□ 0.38
Shisa4Q8CA71 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa4Q8CA71 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa4Q8CA71 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa4Q8CA71 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa4Q8CA71 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa4Q8CA71 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Shisa4Q8CA71 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa4Q8CA71 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shisa4Q8CA71 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.43■□□□□ 0.38
Shisa4Q8CA71 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa4Q8CA71 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.42■□□□□ 0.38
Shisa4Q8CA71 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa4Q8CA71 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa4Q8CA71 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa4Q8CA71 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa4Q8CA71 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa4Q8CA71 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa4Q8CA71 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Shisa4Q8CA71 Gm6973-201ENSMUST00000117080 721 ntBASIC17.42■□□□□ 0.38
Shisa4Q8CA71 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.42■□□□□ 0.38
Shisa4Q8CA71 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.42■□□□□ 0.38
Shisa4Q8CA71 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa4Q8CA71 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.42■□□□□ 0.38
Shisa4Q8CA71 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa4Q8CA71 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.42■□□□□ 0.38
Shisa4Q8CA71 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.42■□□□□ 0.38
Shisa4Q8CA71 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa4Q8CA71 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa4Q8CA71 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Shisa4Q8CA71 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa4Q8CA71 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa4Q8CA71 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa4Q8CA71 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.42■□□□□ 0.38
Shisa4Q8CA71 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa4Q8CA71 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Shisa4Q8CA71 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms