Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtp1Q8C8C1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtp1Q8C8C1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rtp1Q8C8C1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rtp1Q8C8C1 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.12■□□□□ 0.33
Rtp1Q8C8C1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtp1Q8C8C1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rtp1Q8C8C1 Gm24543-201ENSMUST00000103867 82 ntBASIC17.12■□□□□ 0.33
Rtp1Q8C8C1 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rtp1Q8C8C1 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC17.12■□□□□ 0.33
Rtp1Q8C8C1 Gm15824-201ENSMUST00000119516 955 ntBASIC17.12■□□□□ 0.33
Rtp1Q8C8C1 Gm6266-201ENSMUST00000203844 806 ntBASIC17.12■□□□□ 0.33
Rtp1Q8C8C1 Shd-206ENSMUST00000225145 998 ntBASIC17.12■□□□□ 0.33
Rtp1Q8C8C1 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtp1Q8C8C1 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtp1Q8C8C1 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtp1Q8C8C1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtp1Q8C8C1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtp1Q8C8C1 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.12■□□□□ 0.33
Rtp1Q8C8C1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rtp1Q8C8C1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtp1Q8C8C1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtp1Q8C8C1 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rtp1Q8C8C1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.12■□□□□ 0.33
Rtp1Q8C8C1 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp1Q8C8C1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp1Q8C8C1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp1Q8C8C1 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rtp1Q8C8C1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp1Q8C8C1 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp1Q8C8C1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp1Q8C8C1 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp1Q8C8C1 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp1Q8C8C1 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp1Q8C8C1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp1Q8C8C1 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.11■□□□□ 0.33
Rtp1Q8C8C1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rtp1Q8C8C1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp1Q8C8C1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.11■□□□□ 0.33
Rtp1Q8C8C1 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp1Q8C8C1 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp1Q8C8C1 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp1Q8C8C1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp1Q8C8C1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Gm42612-201ENSMUST00000197986 623 ntBASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Gm43170-201ENSMUST00000199827 612 ntBASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Gm45195-201ENSMUST00000205597 1008 ntBASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Gm20445-201ENSMUST00000061905 565 ntBASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtp1Q8C8C1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtp1Q8C8C1 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtp1Q8C8C1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtp1Q8C8C1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtp1Q8C8C1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtp1Q8C8C1 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtp1Q8C8C1 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.09■□□□□ 0.33
Rtp1Q8C8C1 Gm9719-201ENSMUST00000162765 543 ntBASIC17.09■□□□□ 0.33
Rtp1Q8C8C1 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC17.09■□□□□ 0.33
Rtp1Q8C8C1 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms