Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap54Q8C6S9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap54Q8C6S9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap54Q8C6S9 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cfap54Q8C6S9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Mir1247-201ENSMUST00000116706 82 ntBASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Gm45331-201ENSMUST00000209868 554 ntBASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Gm18624-201ENSMUST00000220966 658 ntBASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Dancr-204ENSMUST00000132389 2347 ntBASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.28□□□□□ -0.12
Cfap54Q8C6S9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cfap54Q8C6S9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Cfap54Q8C6S9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cfap54Q8C6S9 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.27□□□□□ -0.12
Cfap54Q8C6S9 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cfap54Q8C6S9 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.27□□□□□ -0.12
Cfap54Q8C6S9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.27□□□□□ -0.12
Cfap54Q8C6S9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.27□□□□□ -0.12
Cfap54Q8C6S9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cfap54Q8C6S9 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cfap54Q8C6S9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Cfap54Q8C6S9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cfap54Q8C6S9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap54Q8C6S9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap54Q8C6S9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Cfap54Q8C6S9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap54Q8C6S9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap54Q8C6S9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap54Q8C6S9 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
Cfap54Q8C6S9 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cfap54Q8C6S9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap54Q8C6S9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cfap54Q8C6S9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cfap54Q8C6S9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cfap54Q8C6S9 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap54Q8C6S9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.27□□□□□ -0.13
Cfap54Q8C6S9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap54Q8C6S9 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap54Q8C6S9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cfap54Q8C6S9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 Gm9257-201ENSMUST00000221254 232 ntBASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cfap54Q8C6S9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cfap54Q8C6S9 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap54Q8C6S9 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap54Q8C6S9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap54Q8C6S9 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.25□□□□□ -0.13
Cfap54Q8C6S9 Mir1897-201ENSMUST00000122581 272 ntBASIC14.25□□□□□ -0.13
Cfap54Q8C6S9 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.25□□□□□ -0.13
Cfap54Q8C6S9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cfap54Q8C6S9 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms