Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tsen54Q8C2A2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Mir770-201ENSMUST00000103252 94 ntBASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Gm6623-201ENSMUST00000173570 544 ntBASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Gm29518-201ENSMUST00000190858 372 ntBASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Gm18421-201ENSMUST00000204122 625 ntBASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tsen54Q8C2A2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Tsen54Q8C2A2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Gm33142-201ENSMUST00000193913 867 ntBASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Gm17808-201ENSMUST00000200859 894 ntBASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tsen54Q8C2A2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tsen54Q8C2A2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tsen54Q8C2A2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tsen54Q8C2A2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tsen54Q8C2A2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Tsen54Q8C2A2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.63□□□□□ -0.39
Tsen54Q8C2A2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tsen54Q8C2A2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tsen54Q8C2A2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms