Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trerf1Q8BXJ2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trerf1Q8BXJ2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trerf1Q8BXJ2 Grk6-207ENSMUST00000225925 2769 ntBASIC15.93■□□□□ 0.14
Trerf1Q8BXJ2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trerf1Q8BXJ2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.93■□□□□ 0.14
Trerf1Q8BXJ2 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trerf1Q8BXJ2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trerf1Q8BXJ2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trerf1Q8BXJ2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trerf1Q8BXJ2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Gm11780-201ENSMUST00000136880 516 ntBASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trerf1Q8BXJ2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Gm25990-201ENSMUST00000102440 86 ntBASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Gm18733-201ENSMUST00000173950 856 ntBASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.91■□□□□ 0.14
Trerf1Q8BXJ2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Gm10060-201ENSMUST00000212002 111 ntBASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trerf1Q8BXJ2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trerf1Q8BXJ2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trerf1Q8BXJ2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms