Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sfr1Q8BP27 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sfr1Q8BP27 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sfr1Q8BP27 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sfr1Q8BP27 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Gm10499-201ENSMUST00000174094 934 ntBASIC15.35■□□□□ 0.05
Sfr1Q8BP27 AW822252-206ENSMUST00000208904 237 ntBASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sfr1Q8BP27 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sfr1Q8BP27 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.34■□□□□ 0.05
Sfr1Q8BP27 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sfr1Q8BP27 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sfr1Q8BP27 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sfr1Q8BP27 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.34■□□□□ 0.05
Sfr1Q8BP27 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sfr1Q8BP27 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sfr1Q8BP27 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sfr1Q8BP27 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sfr1Q8BP27 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sfr1Q8BP27 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sfr1Q8BP27 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sfr1Q8BP27 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.34■□□□□ 0.05
Sfr1Q8BP27 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.34■□□□□ 0.05
Sfr1Q8BP27 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Sfr1Q8BP27 Gm27300-201ENSMUST00000184085 97 ntBASIC15.34■□□□□ 0.05
Sfr1Q8BP27 Gm27335-201ENSMUST00000184758 97 ntBASIC15.34■□□□□ 0.05
Sfr1Q8BP27 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sfr1Q8BP27 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sfr1Q8BP27 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sfr1Q8BP27 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sfr1Q8BP27 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Sfr1Q8BP27 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sfr1Q8BP27 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sfr1Q8BP27 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sfr1Q8BP27 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sfr1Q8BP27 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sfr1Q8BP27 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Sfr1Q8BP27 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sfr1Q8BP27 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.33■□□□□ 0.05
Sfr1Q8BP27 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Sfr1Q8BP27 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sfr1Q8BP27 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sfr1Q8BP27 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sfr1Q8BP27 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sfr1Q8BP27 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sfr1Q8BP27 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sfr1Q8BP27 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sfr1Q8BP27 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sfr1Q8BP27 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sfr1Q8BP27 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sfr1Q8BP27 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sfr1Q8BP27 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Sfr1Q8BP27 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.33■□□□□ 0.04
Sfr1Q8BP27 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sfr1Q8BP27 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sfr1Q8BP27 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sfr1Q8BP27 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sfr1Q8BP27 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sfr1Q8BP27 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sfr1Q8BP27 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.33■□□□□ 0.04
Sfr1Q8BP27 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Sfr1Q8BP27 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sfr1Q8BP27 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Sfr1Q8BP27 Sybu-209ENSMUST00000228639 4113 ntBASIC15.32■□□□□ 0.04
Sfr1Q8BP27 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sfr1Q8BP27 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.32■□□□□ 0.04
Sfr1Q8BP27 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Sfr1Q8BP27 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sfr1Q8BP27 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sfr1Q8BP27 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sfr1Q8BP27 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sfr1Q8BP27 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sfr1Q8BP27 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms