Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf18Q8BM39 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf18Q8BM39 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf18Q8BM39 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf18Q8BM39 Gm17808-201ENSMUST00000200859 894 ntBASIC14.39□□□□□ -0.11
Prpf18Q8BM39 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf18Q8BM39 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf18Q8BM39 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.39□□□□□ -0.11
Prpf18Q8BM39 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf18Q8BM39 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Prpf18Q8BM39 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf18Q8BM39 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.39□□□□□ -0.11
Prpf18Q8BM39 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Prpf18Q8BM39 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf18Q8BM39 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf18Q8BM39 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf18Q8BM39 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.39□□□□□ -0.11
Prpf18Q8BM39 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf18Q8BM39 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf18Q8BM39 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf18Q8BM39 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Prpf18Q8BM39 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Gm29518-201ENSMUST00000190858 372 ntBASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf18Q8BM39 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Gm6257-201ENSMUST00000163864 910 ntBASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Mir6404-201ENSMUST00000183699 94 ntBASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf18Q8BM39 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf18Q8BM39 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms