Protein–RNA interactions for Protein: Q61716

Ifna11, Interferon alpha-11, mousemouse

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna11Q61716 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ifna11Q61716 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.72□□□□□ -0.53
Ifna11Q61716 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Ifna11Q61716 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ifna11Q61716 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ifna11Q61716 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ifna11Q61716 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ifna11Q61716 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
Ifna11Q61716 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Ifna11Q61716 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ifna11Q61716 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC11.72□□□□□ -0.53
Ifna11Q61716 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.72□□□□□ -0.53
Ifna11Q61716 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.72□□□□□ -0.53
Ifna11Q61716 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ifna11Q61716 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ifna11Q61716 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC11.72□□□□□ -0.53
Ifna11Q61716 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.72□□□□□ -0.53
Ifna11Q61716 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ifna11Q61716 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ifna11Q61716 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ifna11Q61716 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ifna11Q61716 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.72□□□□□ -0.53
Ifna11Q61716 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ifna11Q61716 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ifna11Q61716 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ifna11Q61716 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ifna11Q61716 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ifna11Q61716 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ifna11Q61716 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ifna11Q61716 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.71□□□□□ -0.53
Ifna11Q61716 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.71□□□□□ -0.53
Ifna11Q61716 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ifna11Q61716 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ifna11Q61716 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ifna11Q61716 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ifna11Q61716 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ifna11Q61716 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ifna11Q61716 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.71□□□□□ -0.53
Ifna11Q61716 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ifna11Q61716 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ifna11Q61716 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ifna11Q61716 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ifna11Q61716 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ifna11Q61716 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC11.71□□□□□ -0.53
Ifna11Q61716 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Ifna11Q61716 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC11.71□□□□□ -0.53
Ifna11Q61716 AL672049.1-201ENSMUST00000197943 91 ntBASIC11.71□□□□□ -0.53
Ifna11Q61716 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.71□□□□□ -0.53
Ifna11Q61716 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ifna11Q61716 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ifna11Q61716 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ifna11Q61716 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ifna11Q61716 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ifna11Q61716 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ifna11Q61716 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ifna11Q61716 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ifna11Q61716 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ifna11Q61716 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ifna11Q61716 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ifna11Q61716 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ifna11Q61716 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Ifna11Q61716 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ifna11Q61716 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ifna11Q61716 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ifna11Q61716 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Ifna11Q61716 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ifna11Q61716 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ifna11Q61716 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ifna11Q61716 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
Ifna11Q61716 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ifna11Q61716 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ifna11Q61716 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ifna11Q61716 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ifna11Q61716 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.7□□□□□ -0.54
Ifna11Q61716 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ifna11Q61716 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ifna11Q61716 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ifna11Q61716 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ifna11Q61716 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Ifna11Q61716 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ifna11Q61716 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ifna11Q61716 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ifna11Q61716 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ifna11Q61716 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ifna11Q61716 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Ifna11Q61716 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC11.7□□□□□ -0.54
Ifna11Q61716 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ifna11Q61716 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ifna11Q61716 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ifna11Q61716 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ifna11Q61716 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ifna11Q61716 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ifna11Q61716 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ifna11Q61716 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ifna11Q61716 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ifna11Q61716 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ifna11Q61716 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.7□□□□□ -0.54
Ifna11Q61716 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ifna11Q61716 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ifna11Q61716 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms