Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.68■□□□□ 0.1
Smarcd1Q61466 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcd1Q61466 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.68■□□□□ 0.1
Smarcd1Q61466 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcd1Q61466 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcd1Q61466 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcd1Q61466 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Smarcd1Q61466 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Smarcd1Q61466 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.67■□□□□ 0.1
Smarcd1Q61466 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.67■□□□□ 0.1
Smarcd1Q61466 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd1Q61466 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd1Q61466 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Smarcd1Q61466 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd1Q61466 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.66■□□□□ 0.1
Smarcd1Q61466 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd1Q61466 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd1Q61466 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd1Q61466 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd1Q61466 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd1Q61466 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd1Q61466 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd1Q61466 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd1Q61466 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.66■□□□□ 0.1
Smarcd1Q61466 Gm11745-201ENSMUST00000121669 448 ntBASIC15.66■□□□□ 0.1
Smarcd1Q61466 Gm26308-201ENSMUST00000157768 69 ntBASIC15.66■□□□□ 0.1
Smarcd1Q61466 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd1Q61466 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd1Q61466 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd1Q61466 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd1Q61466 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.66■□□□□ 0.1
Smarcd1Q61466 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd1Q61466 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd1Q61466 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd1Q61466 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Smarcd1Q61466 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd1Q61466 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd1Q61466 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd1Q61466 BC037039-201ENSMUST00000192003 2205 ntBASIC15.66■□□□□ 0.1
Smarcd1Q61466 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd1Q61466 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd1Q61466 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Smarcd1Q61466 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd1Q61466 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Smarcd1Q61466 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd1Q61466 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd1Q61466 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.65■□□□□ 0.1
Smarcd1Q61466 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd1Q61466 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd1Q61466 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd1Q61466 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd1Q61466 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd1Q61466 Rprl2-201ENSMUST00000157150 290 ntBASIC15.65■□□□□ 0.1
Smarcd1Q61466 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Smarcd1Q61466 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd1Q61466 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.65■□□□□ 0.1
Smarcd1Q61466 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.65■□□□□ 0.1
Smarcd1Q61466 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd1Q61466 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd1Q61466 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd1Q61466 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd1Q61466 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd1Q61466 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd1Q61466 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.65■□□□□ 0.1
Smarcd1Q61466 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd1Q61466 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd1Q61466 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd1Q61466 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd1Q61466 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd1Q61466 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcd1Q61466 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcd1Q61466 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcd1Q61466 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcd1Q61466 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcd1Q61466 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms