Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-1Q5R1I8 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Gm2420-202ENSMUST00000202224 2249 ntBASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-1Q5R1I8 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC10.16□□□□□ -0.78
Trav3-1Q5R1I8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms