Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-3Q5R1C3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Gm12085-201ENSMUST00000119263 940 ntBASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Gm8520-201ENSMUST00000186517 868 ntBASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-3Q5R1C3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav3-3Q5R1C3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav3-3Q5R1C3 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Gm27463-201ENSMUST00000183569 57 ntBASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-3Q5R1C3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-3Q5R1C3 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms