Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Khdc4Q3TCX3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Gm9682-201ENSMUST00000197505 556 ntBASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Khdc4Q3TCX3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Gm10576-201ENSMUST00000191927 825 ntBASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Chchd1-203ENSMUST00000224633 557 ntBASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Khdc4Q3TCX3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Gm44492-201ENSMUST00000197012 141 ntBASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Khdc4Q3TCX3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Khdc4Q3TCX3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms