Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.82□□□□□ -0.2
Scn1bP97952 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Scn1bP97952 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Scn1bP97952 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Scn1bP97952 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.82□□□□□ -0.2
Scn1bP97952 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1bP97952 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Scn1bP97952 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Gm11336-201ENSMUST00000118168 334 ntBASIC13.81□□□□□ -0.2
Scn1bP97952 Gm13559-201ENSMUST00000120476 863 ntBASIC13.81□□□□□ -0.2
Scn1bP97952 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.81□□□□□ -0.2
Scn1bP97952 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.81□□□□□ -0.2
Scn1bP97952 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.81□□□□□ -0.2
Scn1bP97952 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.81□□□□□ -0.2
Scn1bP97952 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.81□□□□□ -0.2
Scn1bP97952 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Scn1bP97952 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.81□□□□□ -0.2
Scn1bP97952 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Scn1bP97952 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Scn1bP97952 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Scn1bP97952 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn1bP97952 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.8□□□□□ -0.2
Scn1bP97952 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1bP97952 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1bP97952 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1bP97952 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1bP97952 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.8□□□□□ -0.2
Scn1bP97952 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Scn1bP97952 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1bP97952 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1bP97952 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Scn1bP97952 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1bP97952 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1bP97952 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Scn1bP97952 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1bP97952 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Scn1bP97952 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Scn1bP97952 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.8□□□□□ -0.2
Scn1bP97952 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1bP97952 Gm18959-201ENSMUST00000208954 655 ntBASIC13.8□□□□□ -0.2
Scn1bP97952 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.8□□□□□ -0.2
Scn1bP97952 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1bP97952 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.8□□□□□ -0.2
Scn1bP97952 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.8□□□□□ -0.2
Scn1bP97952 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Scn1bP97952 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1bP97952 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1bP97952 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.8□□□□□ -0.2
Scn1bP97952 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1bP97952 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Scn1bP97952 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1bP97952 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Scn1bP97952 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Scn1bP97952 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Scn1bP97952 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1bP97952 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn1bP97952 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms