Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stra8P70278 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stra8P70278 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stra8P70278 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stra8P70278 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stra8P70278 Gm14722-201ENSMUST00000118943 689 ntBASIC20.84■□□□□ 0.93
Stra8P70278 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.84■□□□□ 0.93
Stra8P70278 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC20.84■□□□□ 0.93
Stra8P70278 Gm8349-201ENSMUST00000182720 1003 ntBASIC20.84■□□□□ 0.93
Stra8P70278 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stra8P70278 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stra8P70278 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Stra8P70278 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stra8P70278 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stra8P70278 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC20.84■□□□□ 0.93
Stra8P70278 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Stra8P70278 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Stra8P70278 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC20.83■□□□□ 0.93
Stra8P70278 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Stra8P70278 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Stra8P70278 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Stra8P70278 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Stra8P70278 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Stra8P70278 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Stra8P70278 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Stra8P70278 Gm15372-201ENSMUST00000120729 834 ntBASIC20.83■□□□□ 0.93
Stra8P70278 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC20.83■□□□□ 0.93
Stra8P70278 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Stra8P70278 Gm7506-201ENSMUST00000207758 815 ntBASIC20.83■□□□□ 0.93
Stra8P70278 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Stra8P70278 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Stra8P70278 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Stra8P70278 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Stra8P70278 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Stra8P70278 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Stra8P70278 Fbxl12-205ENSMUST00000140702 1555 ntBASIC20.83■□□□□ 0.92
Stra8P70278 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Stra8P70278 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Stra8P70278 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Stra8P70278 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Stra8P70278 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Stra8P70278 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Stra8P70278 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stra8P70278 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Stra8P70278 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stra8P70278 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stra8P70278 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Stra8P70278 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Stra8P70278 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stra8P70278 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stra8P70278 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.82■□□□□ 0.92
Stra8P70278 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Stra8P70278 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
Stra8P70278 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.82■□□□□ 0.92
Stra8P70278 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Stra8P70278 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stra8P70278 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stra8P70278 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stra8P70278 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Stra8P70278 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stra8P70278 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stra8P70278 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Stra8P70278 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stra8P70278 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC20.82■□□□□ 0.92
Stra8P70278 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stra8P70278 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stra8P70278 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Stra8P70278 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Stra8P70278 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stra8P70278 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stra8P70278 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Stra8P70278 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stra8P70278 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stra8P70278 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stra8P70278 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Stra8P70278 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stra8P70278 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Stra8P70278 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Stra8P70278 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Stra8P70278 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Stra8P70278 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stra8P70278 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Stra8P70278 Gm25406-201ENSMUST00000157599 105 ntBASIC20.81■□□□□ 0.92
Stra8P70278 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.81■□□□□ 0.92
Stra8P70278 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.81■□□□□ 0.92
Stra8P70278 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Stra8P70278 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stra8P70278 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stra8P70278 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stra8P70278 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stra8P70278 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Stra8P70278 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC20.81■□□□□ 0.92
Stra8P70278 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Stra8P70278 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stra8P70278 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Stra8P70278 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stra8P70278 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stra8P70278 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stra8P70278 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stra8P70278 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms