Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3b6P59708 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3b6P59708 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.4□□□□□ -0.26
Sf3b6P59708 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3b6P59708 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.4□□□□□ -0.26
Sf3b6P59708 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3b6P59708 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.4□□□□□ -0.26
Sf3b6P59708 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3b6P59708 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.4□□□□□ -0.26
Sf3b6P59708 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3b6P59708 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.4□□□□□ -0.26
Sf3b6P59708 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3b6P59708 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3b6P59708 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3b6P59708 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3b6P59708 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3b6P59708 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3b6P59708 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Sf3b6P59708 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3b6P59708 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3b6P59708 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3b6P59708 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3b6P59708 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3b6P59708 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3b6P59708 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.4□□□□□ -0.26
Sf3b6P59708 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sf3b6P59708 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Sf3b6P59708 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Sf3b6P59708 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Sf3b6P59708 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3b6P59708 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.39□□□□□ -0.27
Sf3b6P59708 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3b6P59708 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3b6P59708 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3b6P59708 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3b6P59708 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Sf3b6P59708 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3b6P59708 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.39□□□□□ -0.27
Sf3b6P59708 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3b6P59708 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sf3b6P59708 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sf3b6P59708 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Sf3b6P59708 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3b6P59708 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3b6P59708 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3b6P59708 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3b6P59708 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3b6P59708 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.39□□□□□ -0.27
Sf3b6P59708 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.39□□□□□ -0.27
Sf3b6P59708 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3b6P59708 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3b6P59708 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Sf3b6P59708 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3b6P59708 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sf3b6P59708 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3b6P59708 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Sf3b6P59708 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sf3b6P59708 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3b6P59708 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3b6P59708 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.39□□□□□ -0.27
Sf3b6P59708 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Sf3b6P59708 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3b6P59708 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.39□□□□□ -0.27
Sf3b6P59708 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sf3b6P59708 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Sf3b6P59708 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b6P59708 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b6P59708 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b6P59708 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.38□□□□□ -0.27
Sf3b6P59708 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b6P59708 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b6P59708 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b6P59708 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b6P59708 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.38□□□□□ -0.27
Sf3b6P59708 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b6P59708 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b6P59708 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.38□□□□□ -0.27
Sf3b6P59708 Gm19164-201ENSMUST00000210667 640 ntBASIC13.38□□□□□ -0.27
Sf3b6P59708 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b6P59708 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b6P59708 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b6P59708 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b6P59708 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b6P59708 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b6P59708 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b6P59708 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b6P59708 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b6P59708 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b6P59708 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.38□□□□□ -0.27
Sf3b6P59708 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
Sf3b6P59708 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sf3b6P59708 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b6P59708 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sf3b6P59708 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.38□□□□□ -0.27
Sf3b6P59708 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b6P59708 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b6P59708 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sf3b6P59708 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Sf3b6P59708 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.37□□□□□ -0.27
Sf3b6P59708 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms