Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.98□□□□□ -0.01
Atxn1P54254 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.98□□□□□ -0.01
Atxn1P54254 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atxn1P54254 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Atxn1P54254 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atxn1P54254 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Atxn1P54254 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.98□□□□□ -0.01
Atxn1P54254 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.98□□□□□ -0.01
Atxn1P54254 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.98□□□□□ -0.01
Atxn1P54254 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.98□□□□□ -0.01
Atxn1P54254 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.98□□□□□ -0.01
Atxn1P54254 Gm17837-201ENSMUST00000186435 985 ntBASIC14.98□□□□□ -0.01
Atxn1P54254 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Atxn1P54254 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.98□□□□□ -0.01
Atxn1P54254 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.98□□□□□ -0.01
Atxn1P54254 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atxn1P54254 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atxn1P54254 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atxn1P54254 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atxn1P54254 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atxn1P54254 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Atxn1P54254 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atxn1P54254 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Atxn1P54254 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atxn1P54254 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atxn1P54254 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.98□□□□□ -0.01
Atxn1P54254 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atxn1P54254 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atxn1P54254 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atxn1P54254 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atxn1P54254 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atxn1P54254 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Atxn1P54254 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atxn1P54254 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atxn1P54254 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Atxn1P54254 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atxn1P54254 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atxn1P54254 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atxn1P54254 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atxn1P54254 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atxn1P54254 Gm25287-201ENSMUST00000103846 110 ntBASIC14.97□□□□□ -0.01
Atxn1P54254 Gm22918-201ENSMUST00000103855 110 ntBASIC14.97□□□□□ -0.01
Atxn1P54254 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atxn1P54254 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Atxn1P54254 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Atxn1P54254 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.97□□□□□ -0.01
Atxn1P54254 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atxn1P54254 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.97□□□□□ -0.01
Atxn1P54254 Gm9794-201ENSMUST00000202370 423 ntBASIC14.97□□□□□ -0.01
Atxn1P54254 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.97□□□□□ -0.01
Atxn1P54254 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.97□□□□□ -0.01
Atxn1P54254 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.97□□□□□ -0.01
Atxn1P54254 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.97□□□□□ -0.01
Atxn1P54254 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atxn1P54254 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atxn1P54254 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atxn1P54254 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atxn1P54254 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Atxn1P54254 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atxn1P54254 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atxn1P54254 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.97□□□□□ -0.01
Atxn1P54254 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Atxn1P54254 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atxn1P54254 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Atxn1P54254 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Atxn1P54254 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Atxn1P54254 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Atxn1P54254 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Atxn1P54254 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Atxn1P54254 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Atxn1P54254 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.96□□□□□ -0.01
Atxn1P54254 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Atxn1P54254 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Atxn1P54254 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Atxn1P54254 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Atxn1P54254 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Atxn1P54254 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Atxn1P54254 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Atxn1P54254 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Atxn1P54254 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.96□□□□□ -0.01
Atxn1P54254 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Atxn1P54254 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.96□□□□□ -0.01
Atxn1P54254 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.96□□□□□ -0.01
Atxn1P54254 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Atxn1P54254 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.96□□□□□ -0.01
Atxn1P54254 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Atxn1P54254 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Atxn1P54254 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Atxn1P54254 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Atxn1P54254 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Atxn1P54254 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.96□□□□□ -0.01
Atxn1P54254 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Atxn1P54254 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Atxn1P54254 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.96□□□□□ -0.02
Atxn1P54254 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Atxn1P54254 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Atxn1P54254 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Atxn1P54254 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
Atxn1P54254 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Atxn1P54254 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms