Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-1P50220 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-1P50220 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-1P50220 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-1P50220 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-1P50220 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-1P50220 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-1P50220 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-1P50220 Gm9013-201ENSMUST00000132939 882 ntBASIC12.53□□□□□ -0.4
Nkx2-1P50220 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.53□□□□□ -0.4
Nkx2-1P50220 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.53□□□□□ -0.4
Nkx2-1P50220 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
Nkx2-1P50220 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-1P50220 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nkx2-1P50220 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-1P50220 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-1P50220 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nkx2-1P50220 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-1P50220 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nkx2-1P50220 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-1P50220 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.53□□□□□ -0.4
Nkx2-1P50220 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-1P50220 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-1P50220 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nkx2-1P50220 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-1P50220 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-1P50220 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-1P50220 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-1P50220 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-1P50220 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-1P50220 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-1P50220 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-1P50220 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-1P50220 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-1P50220 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.52□□□□□ -0.4
Nkx2-1P50220 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-1P50220 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-1P50220 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-1P50220 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Nkx2-1P50220 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.52□□□□□ -0.41
Nkx2-1P50220 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-1P50220 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.52□□□□□ -0.41
Nkx2-1P50220 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.52□□□□□ -0.41
Nkx2-1P50220 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.52□□□□□ -0.41
Nkx2-1P50220 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.52□□□□□ -0.41
Nkx2-1P50220 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.52□□□□□ -0.41
Nkx2-1P50220 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-1P50220 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-1P50220 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-1P50220 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-1P50220 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Nkx2-1P50220 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-1P50220 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.52□□□□□ -0.41
Nkx2-1P50220 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-1P50220 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Nkx2-1P50220 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-1P50220 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-1P50220 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-1P50220 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-1P50220 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Nkx2-1P50220 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-1P50220 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-1P50220 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.51□□□□□ -0.41
Nkx2-1P50220 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-1P50220 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-1P50220 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nkx2-1P50220 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-1P50220 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-1P50220 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.51□□□□□ -0.41
Nkx2-1P50220 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-1P50220 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Nkx2-1P50220 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-1P50220 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-1P50220 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-1P50220 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nkx2-1P50220 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-1P50220 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-1P50220 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-1P50220 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.51□□□□□ -0.41
Nkx2-1P50220 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-1P50220 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-1P50220 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-1P50220 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-1P50220 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-1P50220 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-1P50220 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-1P50220 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-1P50220 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-1P50220 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-1P50220 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-1P50220 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-1P50220 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Nkx2-1P50220 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-1P50220 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Nkx2-1P50220 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-1P50220 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-1P50220 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.5□□□□□ -0.41
Nkx2-1P50220 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-1P50220 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx2-1P50220 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms