Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm6218-201ENSMUST00000219812 628 ntBASIC13.89□□□□□ -0.19
Sftpa1P35242 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sftpa1P35242 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sftpa1P35242 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Sftpa1P35242 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sftpa1P35242 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sftpa1P35242 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Sftpa1P35242 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sftpa1P35242 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sftpa1P35242 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sftpa1P35242 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sftpa1P35242 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Sftpa1P35242 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sftpa1P35242 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sftpa1P35242 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.89□□□□□ -0.19
Sftpa1P35242 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.88□□□□□ -0.19
Sftpa1P35242 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Sftpa1P35242 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.88□□□□□ -0.19
Sftpa1P35242 Gm27680-201ENSMUST00000184192 160 ntBASIC13.88□□□□□ -0.19
Sftpa1P35242 Gm18187-201ENSMUST00000196476 984 ntBASIC13.88□□□□□ -0.19
Sftpa1P35242 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Sftpa1P35242 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Sftpa1P35242 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.88□□□□□ -0.19
Sftpa1P35242 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.88□□□□□ -0.19
Sftpa1P35242 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sftpa1P35242 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sftpa1P35242 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sftpa1P35242 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sftpa1P35242 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sftpa1P35242 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sftpa1P35242 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sftpa1P35242 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sftpa1P35242 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.87□□□□□ -0.19
Sftpa1P35242 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sftpa1P35242 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sftpa1P35242 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Sftpa1P35242 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Sftpa1P35242 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.87□□□□□ -0.19
Sftpa1P35242 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sftpa1P35242 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.87□□□□□ -0.19
Sftpa1P35242 Gm15321-201ENSMUST00000121290 288 ntBASIC13.87□□□□□ -0.19
Sftpa1P35242 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.87□□□□□ -0.19
Sftpa1P35242 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.87□□□□□ -0.19
Sftpa1P35242 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.87□□□□□ -0.19
Sftpa1P35242 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sftpa1P35242 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Sftpa1P35242 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Sftpa1P35242 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sftpa1P35242 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sftpa1P35242 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sftpa1P35242 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sftpa1P35242 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sftpa1P35242 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.87□□□□□ -0.19
Sftpa1P35242 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sftpa1P35242 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sftpa1P35242 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sftpa1P35242 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Sftpa1P35242 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sftpa1P35242 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sftpa1P35242 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sftpa1P35242 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sftpa1P35242 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sftpa1P35242 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Sftpa1P35242 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sftpa1P35242 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Sftpa1P35242 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sftpa1P35242 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sftpa1P35242 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sftpa1P35242 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Sftpa1P35242 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.86□□□□□ -0.19
Sftpa1P35242 Gm12859-201ENSMUST00000117834 427 ntBASIC13.86□□□□□ -0.19
Sftpa1P35242 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.86□□□□□ -0.19
Sftpa1P35242 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sftpa1P35242 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sftpa1P35242 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.86□□□□□ -0.19
Sftpa1P35242 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms