Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nedd8P29595 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nedd8P29595 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nedd8P29595 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.99□□□□□ -0.17
Nedd8P29595 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nedd8P29595 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nedd8P29595 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nedd8P29595 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nedd8P29595 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nedd8P29595 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
Nedd8P29595 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nedd8P29595 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nedd8P29595 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nedd8P29595 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.98□□□□□ -0.17
Nedd8P29595 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nedd8P29595 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nedd8P29595 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nedd8P29595 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nedd8P29595 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.98□□□□□ -0.17
Nedd8P29595 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nedd8P29595 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nedd8P29595 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nedd8P29595 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nedd8P29595 Gm12933-201ENSMUST00000120203 872 ntBASIC13.98□□□□□ -0.17
Nedd8P29595 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nedd8P29595 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.98□□□□□ -0.17
Nedd8P29595 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.98□□□□□ -0.17
Nedd8P29595 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.98□□□□□ -0.17
Nedd8P29595 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nedd8P29595 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nedd8P29595 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nedd8P29595 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Nedd8P29595 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.98□□□□□ -0.17
Nedd8P29595 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nedd8P29595 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nedd8P29595 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nedd8P29595 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nedd8P29595 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nedd8P29595 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nedd8P29595 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nedd8P29595 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nedd8P29595 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nedd8P29595 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nedd8P29595 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nedd8P29595 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nedd8P29595 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Nedd8P29595 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Nedd8P29595 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Nedd8P29595 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.97□□□□□ -0.17
Nedd8P29595 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nedd8P29595 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nedd8P29595 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nedd8P29595 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nedd8P29595 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nedd8P29595 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nedd8P29595 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nedd8P29595 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Nedd8P29595 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nedd8P29595 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nedd8P29595 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Nedd8P29595 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nedd8P29595 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nedd8P29595 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nedd8P29595 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nedd8P29595 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nedd8P29595 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nedd8P29595 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nedd8P29595 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nedd8P29595 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nedd8P29595 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nedd8P29595 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Nedd8P29595 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nedd8P29595 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nedd8P29595 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nedd8P29595 Gm15378-201ENSMUST00000121894 207 ntBASIC13.96□□□□□ -0.17
Nedd8P29595 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nedd8P29595 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nedd8P29595 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nedd8P29595 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.96□□□□□ -0.17
Nedd8P29595 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.96□□□□□ -0.17
Nedd8P29595 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nedd8P29595 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nedd8P29595 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Nedd8P29595 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Nedd8P29595 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nedd8P29595 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Nedd8P29595 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nedd8P29595 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nedd8P29595 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nedd8P29595 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.96□□□□□ -0.18
Nedd8P29595 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.18
Nedd8P29595 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nedd8P29595 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Nedd8P29595 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Nedd8P29595 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nedd8P29595 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nedd8P29595 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nedd8P29595 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.95□□□□□ -0.18
Nedd8P29595 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nedd8P29595 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms