Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6aP27664 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6aP27664 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pde6aP27664 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6aP27664 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6aP27664 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6aP27664 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6aP27664 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6aP27664 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.47■□□□□ 0.39
Pde6aP27664 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6aP27664 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pde6aP27664 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6aP27664 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6aP27664 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6aP27664 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.47■□□□□ 0.39
Pde6aP27664 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6aP27664 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6aP27664 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6aP27664 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6aP27664 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6aP27664 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6aP27664 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6aP27664 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.47■□□□□ 0.39
Pde6aP27664 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6aP27664 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6aP27664 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6aP27664 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.47■□□□□ 0.39
Pde6aP27664 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pde6aP27664 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Pde6aP27664 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6aP27664 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.46■□□□□ 0.39
Pde6aP27664 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6aP27664 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6aP27664 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pde6aP27664 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6aP27664 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.46■□□□□ 0.39
Pde6aP27664 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6aP27664 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6aP27664 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Pde6aP27664 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6aP27664 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6aP27664 Gm9385-201ENSMUST00000117563 472 ntBASIC17.46■□□□□ 0.39
Pde6aP27664 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6aP27664 Gm27301-201ENSMUST00000184012 127 ntBASIC17.46■□□□□ 0.39
Pde6aP27664 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.46■□□□□ 0.39
Pde6aP27664 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Pde6aP27664 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6aP27664 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6aP27664 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6aP27664 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6aP27664 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6aP27664 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pde6aP27664 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
Pde6aP27664 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pde6aP27664 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pde6aP27664 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6aP27664 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6aP27664 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6aP27664 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6aP27664 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6aP27664 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6aP27664 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6aP27664 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.45■□□□□ 0.38
Pde6aP27664 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6aP27664 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.45■□□□□ 0.38
Pde6aP27664 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6aP27664 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.45■□□□□ 0.38
Pde6aP27664 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6aP27664 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6aP27664 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.45■□□□□ 0.38
Pde6aP27664 Gm10154-201ENSMUST00000084445 354 ntBASIC17.45■□□□□ 0.38
Pde6aP27664 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6aP27664 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6aP27664 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pde6aP27664 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6aP27664 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Pde6aP27664 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6aP27664 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6aP27664 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6aP27664 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6aP27664 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6aP27664 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pde6aP27664 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6aP27664 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6aP27664 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6aP27664 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6aP27664 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6aP27664 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.44■□□□□ 0.38
Pde6aP27664 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6aP27664 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.44■□□□□ 0.38
Pde6aP27664 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6aP27664 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6aP27664 Efs-202ENSMUST00000227037 2540 ntBASIC17.44■□□□□ 0.38
Pde6aP27664 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6aP27664 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6aP27664 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.44■□□□□ 0.38
Pde6aP27664 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.44■□□□□ 0.38
Pde6aP27664 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pde6aP27664 Gm25911-201ENSMUST00000157621 56 ntBASIC17.44■□□□□ 0.38
Pde6aP27664 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms