Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl3P27659 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl3P27659 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl3P27659 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Rpl3P27659 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.31□□□□□ -0.12
Rpl3P27659 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.31□□□□□ -0.12
Rpl3P27659 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.31□□□□□ -0.12
Rpl3P27659 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl3P27659 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl3P27659 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl3P27659 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl3P27659 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl3P27659 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl3P27659 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl3P27659 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl3P27659 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl3P27659 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl3P27659 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl3P27659 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.3□□□□□ -0.12
Rpl3P27659 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl3P27659 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl3P27659 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl3P27659 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl3P27659 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl3P27659 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl3P27659 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl3P27659 Gm25990-201ENSMUST00000102440 86 ntBASIC14.3□□□□□ -0.12
Rpl3P27659 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl3P27659 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl3P27659 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Rpl3P27659 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl3P27659 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl3P27659 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.3□□□□□ -0.12
Rpl3P27659 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.3□□□□□ -0.12
Rpl3P27659 Gm21362-201ENSMUST00000194272 928 ntBASIC14.3□□□□□ -0.12
Rpl3P27659 Gm43767-201ENSMUST00000198933 381 ntBASIC14.3□□□□□ -0.12
Rpl3P27659 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.3□□□□□ -0.12
Rpl3P27659 Gm7787-201ENSMUST00000216858 688 ntBASIC14.3□□□□□ -0.12
Rpl3P27659 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.3□□□□□ -0.12
Rpl3P27659 Birc2-201ENSMUST00000054878 378 ntBASIC14.3□□□□□ -0.12
Rpl3P27659 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl3P27659 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rpl3P27659 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl3P27659 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.3□□□□□ -0.12
Rpl3P27659 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl3P27659 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Rpl3P27659 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl3P27659 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl3P27659 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl3P27659 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.3□□□□□ -0.12
Rpl3P27659 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl3P27659 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
Rpl3P27659 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Rpl3P27659 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl3P27659 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl3P27659 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl3P27659 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl3P27659 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rpl3P27659 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl3P27659 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl3P27659 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl3P27659 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl3P27659 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl3P27659 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl3P27659 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.29□□□□□ -0.12
Rpl3P27659 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl3P27659 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl3P27659 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.29□□□□□ -0.12
Rpl3P27659 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl3P27659 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.29□□□□□ -0.12
Rpl3P27659 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl3P27659 Rps4l-201ENSMUST00000071745 943 ntBASIC14.29□□□□□ -0.12
Rpl3P27659 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rpl3P27659 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.29□□□□□ -0.12
Rpl3P27659 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl3P27659 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl3P27659 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl3P27659 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rpl3P27659 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.29□□□□□ -0.12
Rpl3P27659 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl3P27659 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Rpl3P27659 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rpl3P27659 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl3P27659 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl3P27659 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl3P27659 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl3P27659 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl3P27659 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl3P27659 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl3P27659 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl3P27659 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl3P27659 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl3P27659 Gm11764-201ENSMUST00000120221 623 ntBASIC14.28□□□□□ -0.12
Rpl3P27659 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl3P27659 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl3P27659 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.28□□□□□ -0.12
Rpl3P27659 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.28□□□□□ -0.12
Rpl3P27659 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.28□□□□□ -0.12
Rpl3P27659 Gm27459-201ENSMUST00000184860 107 ntBASIC14.28□□□□□ -0.12
Rpl3P27659 Gm44357-201ENSMUST00000195897 142 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms