Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm21899-201ENSMUST00000190745 696 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm21910-201ENSMUST00000191163 696 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm21849-201ENSMUST00000191571 696 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm28678-201ENSMUST00000191593 696 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm20910-201ENSMUST00000193268 696 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm21871-201ENSMUST00000194621 696 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm2451-201ENSMUST00000199447 999 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm10290-201ENSMUST00000200451 999 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Hoxc9P09633 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.44■□□□□ 0.7
Hoxc9P09633 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Hoxc9P09633 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc9P09633 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc9P09633 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC19.44■□□□□ 0.7
Hoxc9P09633 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc9P09633 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc9P09633 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc9P09633 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc9P09633 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc9P09633 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Hoxc9P09633 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC19.43■□□□□ 0.7
Hoxc9P09633 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc9P09633 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Hoxc9P09633 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc9P09633 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc9P09633 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC19.43■□□□□ 0.7
Hoxc9P09633 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC19.43■□□□□ 0.7
Hoxc9P09633 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc9P09633 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC19.43■□□□□ 0.7
Hoxc9P09633 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc9P09633 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc9P09633 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Hoxc9P09633 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc9P09633 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Hoxc9P09633 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc9P09633 Prob1-201ENSMUST00000097619 3021 ntBASIC19.43■□□□□ 0.7
Hoxc9P09633 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Hoxc9P09633 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxc9P09633 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Hoxc9P09633 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Hoxc9P09633 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Hoxc9P09633 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc9P09633 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc9P09633 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc9P09633 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc9P09633 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Hoxc9P09633 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc9P09633 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC19.42■□□□□ 0.7
Hoxc9P09633 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Hoxc9P09633 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC19.42■□□□□ 0.7
Hoxc9P09633 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc9P09633 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc9P09633 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC19.42■□□□□ 0.7
Hoxc9P09633 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc9P09633 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC19.42■□□□□ 0.7
Hoxc9P09633 Gm45098-201ENSMUST00000207179 657 ntBASIC19.42■□□□□ 0.7
Hoxc9P09633 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Hoxc9P09633 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC19.42■□□□□ 0.7
Hoxc9P09633 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc9P09633 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc9P09633 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc9P09633 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc9P09633 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc9P09633 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc9P09633 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc9P09633 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc9P09633 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc9P09633 Gm5320-201ENSMUST00000207163 1519 ntBASIC19.41■□□□□ 0.7
Hoxc9P09633 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc9P09633 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc9P09633 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Hoxc9P09633 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc9P09633 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
Hoxc9P09633 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Hoxc9P09633 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Hoxc9P09633 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Hoxc9P09633 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc9P09633 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.41■□□□□ 0.7
Hoxc9P09633 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc9P09633 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc9P09633 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc9P09633 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc9P09633 Gm3365-201ENSMUST00000216296 1480 ntBASIC19.41■□□□□ 0.7
Hoxc9P09633 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc9P09633 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc9P09633 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Hoxc9P09633 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc9P09633 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc9P09633 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc9P09633 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc9P09633 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc9P09633 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc9P09633 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Hoxc9P09633 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc9P09633 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc9P09633 Mir1897-201ENSMUST00000122581 272 ntBASIC19.4■□□□□ 0.7
Hoxc9P09633 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Hoxc9P09633 Gm24694-201ENSMUST00000180054 110 ntBASIC19.4■□□□□ 0.7
Hoxc9P09633 Gm6944-201ENSMUST00000182449 1006 ntBASIC19.4■□□□□ 0.7
Hoxc9P09633 Gm27663-201ENSMUST00000184839 110 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms