Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16■□□□□ 0.15
ERCC1P07992 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16■□□□□ 0.15
ERCC1P07992 GRAMD4P1-201ENST00000435181 1110 ntBASIC16■□□□□ 0.15
ERCC1P07992 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16■□□□□ 0.15
ERCC1P07992 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16■□□□□ 0.15
ERCC1P07992 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16■□□□□ 0.15
ERCC1P07992 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16■□□□□ 0.15
ERCC1P07992 AC008622.2-201ENST00000617006 1229 ntBASIC16■□□□□ 0.15
ERCC1P07992 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16■□□□□ 0.15
ERCC1P07992 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
ERCC1P07992 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16■□□□□ 0.15
ERCC1P07992 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16■□□□□ 0.15
ERCC1P07992 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16■□□□□ 0.15
ERCC1P07992 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16■□□□□ 0.15
ERCC1P07992 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ERCC1P07992 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
ERCC1P07992 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16■□□□□ 0.15
ERCC1P07992 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
ERCC1P07992 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ERCC1P07992 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ERCC1P07992 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ERCC1P07992 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ERCC1P07992 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ERCC1P07992 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ERCC1P07992 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ERCC1P07992 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.99■□□□□ 0.15
ERCC1P07992 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ERCC1P07992 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ERCC1P07992 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.99■□□□□ 0.15
ERCC1P07992 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.99■□□□□ 0.15
ERCC1P07992 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
ERCC1P07992 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.99■□□□□ 0.15
ERCC1P07992 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ERCC1P07992 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ERCC1P07992 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ERCC1P07992 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.99■□□□□ 0.15
ERCC1P07992 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ERCC1P07992 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.99■□□□□ 0.15
ERCC1P07992 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
ERCC1P07992 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ERCC1P07992 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.99■□□□□ 0.15
ERCC1P07992 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.99■□□□□ 0.15
ERCC1P07992 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC1P07992 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
ERCC1P07992 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
ERCC1P07992 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC1P07992 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC1P07992 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC1P07992 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.98■□□□□ 0.15
ERCC1P07992 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
ERCC1P07992 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC1P07992 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC1P07992 ESPNP-201ENST00000270691 2015 ntBASIC15.98■□□□□ 0.15
ERCC1P07992 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
ERCC1P07992 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC1P07992 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.98■□□□□ 0.15
ERCC1P07992 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.98■□□□□ 0.15
ERCC1P07992 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.98■□□□□ 0.15
ERCC1P07992 AL359075.1-203ENST00000462729 1002 ntBASIC15.98■□□□□ 0.15
ERCC1P07992 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
ERCC1P07992 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.98■□□□□ 0.15
ERCC1P07992 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.98■□□□□ 0.15
ERCC1P07992 MIR3180-5-201ENST00000583743 153 ntBASIC15.98■□□□□ 0.15
ERCC1P07992 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC1P07992 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
ERCC1P07992 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC1P07992 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
ERCC1P07992 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC1P07992 FLJ13224-201ENST00000313737 1514 ntBASIC15.98■□□□□ 0.15
ERCC1P07992 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.98■□□□□ 0.15
ERCC1P07992 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.98■□□□□ 0.15
ERCC1P07992 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC1P07992 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC1P07992 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC1P07992 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ERCC1P07992 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
ERCC1P07992 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.97■□□□□ 0.15
ERCC1P07992 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC1P07992 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
ERCC1P07992 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
ERCC1P07992 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.97■□□□□ 0.15
ERCC1P07992 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.97■□□□□ 0.15
ERCC1P07992 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
ERCC1P07992 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC1P07992 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC1P07992 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC1P07992 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
ERCC1P07992 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
ERCC1P07992 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC1P07992 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC1P07992 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.97■□□□□ 0.15
ERCC1P07992 AL671277.2-201ENST00000458060 996 ntBASIC15.97■□□□□ 0.15
ERCC1P07992 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.97■□□□□ 0.15
ERCC1P07992 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC1P07992 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC1P07992 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
ERCC1P07992 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.97■□□□□ 0.15
ERCC1P07992 CR769767.2-201ENST00000622735 460 ntBASIC15.97■□□□□ 0.15
ERCC1P07992 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC1P07992 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms