Protein–RNA interactions for Protein: O88676

Mmp23, Matrix metalloproteinase-23, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp23O88676 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Mmp23O88676 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Mmp23O88676 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Mmp23O88676 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Mmp23O88676 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Mmp23O88676 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Mmp23O88676 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.41□□□□□ -0.58
Mmp23O88676 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Mmp23O88676 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Mmp23O88676 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Mmp23O88676 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Mmp23O88676 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Mmp23O88676 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Mmp23O88676 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.58
Mmp23O88676 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Mmp23O88676 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Mmp23O88676 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 Gm13181-201ENSMUST00000120117 1069 ntBASIC11.4□□□□□ -0.58
Mmp23O88676 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 Trmt13-210ENSMUST00000198454 880 ntBASIC11.4□□□□□ -0.58
Mmp23O88676 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Mmp23O88676 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.4□□□□□ -0.58
Mmp23O88676 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Mmp23O88676 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Mmp23O88676 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Mmp23O88676 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Mmp23O88676 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.4□□□□□ -0.59
Mmp23O88676 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.59
Mmp23O88676 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Mmp23O88676 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.4□□□□□ -0.59
Mmp23O88676 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.4□□□□□ -0.59
Mmp23O88676 Matn2-206ENSMUST00000228570 2798 ntBASIC11.39□□□□□ -0.59
Mmp23O88676 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Mmp23O88676 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Mmp23O88676 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Mmp23O88676 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Mmp23O88676 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Mmp23O88676 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Mmp23O88676 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Mmp23O88676 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Mmp23O88676 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Mmp23O88676 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Mmp23O88676 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Mmp23O88676 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Mmp23O88676 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Mmp23O88676 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms