Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gm25871-201ENSMUST00000177816 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm24752-201ENSMUST00000178240 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm24496-201ENSMUST00000178287 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm25649-201ENSMUST00000178476 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm25548-201ENSMUST00000178681 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm23147-201ENSMUST00000178841 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm26095-201ENSMUST00000179270 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm22171-201ENSMUST00000179283 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm23936-201ENSMUST00000179354 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm22619-201ENSMUST00000179516 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm25255-201ENSMUST00000179579 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm24755-201ENSMUST00000179691 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm26506-201ENSMUST00000179692 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm25086-201ENSMUST00000179931 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm23243-201ENSMUST00000180047 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm24659-201ENSMUST00000180212 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm24169-201ENSMUST00000180244 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm23689-201ENSMUST00000180354 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm27359-201ENSMUST00000184153 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm27785-201ENSMUST00000184268 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm27466-201ENSMUST00000184396 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Gm27703-201ENSMUST00000184836 110 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.94□□□□□ -0.34
Cldn1O88551 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cldn1O88551 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn1O88551 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cldn1O88551 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn1O88551 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn1O88551 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.94□□□□□ -0.34
Cldn1O88551 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn1O88551 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn1O88551 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn1O88551 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn1O88551 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cldn1O88551 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn1O88551 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cldn1O88551 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cldn1O88551 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cldn1O88551 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.93□□□□□ -0.34
Cldn1O88551 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.93□□□□□ -0.34
Cldn1O88551 Gm24158-201ENSMUST00000175263 71 ntBASIC12.93□□□□□ -0.34
Cldn1O88551 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cldn1O88551 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Gm5779-201ENSMUST00000218467 910 ntBASIC12.93□□□□□ -0.34
Cldn1O88551 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.93□□□□□ -0.34
Cldn1O88551 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.93□□□□□ -0.34
Cldn1O88551 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cldn1O88551 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn1O88551 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.92□□□□□ -0.34
Cldn1O88551 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn1O88551 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn1O88551 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cldn1O88551 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.92□□□□□ -0.34
Cldn1O88551 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn1O88551 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn1O88551 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.92□□□□□ -0.34
Cldn1O88551 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn1O88551 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn1O88551 Gm13823-201ENSMUST00000119930 345 ntBASIC12.92□□□□□ -0.34
Cldn1O88551 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.92□□□□□ -0.34
Cldn1O88551 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn1O88551 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Cldn1O88551 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.92□□□□□ -0.34
Cldn1O88551 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn1O88551 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.92□□□□□ -0.34
Cldn1O88551 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.92□□□□□ -0.34
Cldn1O88551 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.92□□□□□ -0.34
Cldn1O88551 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.92□□□□□ -0.34
Cldn1O88551 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn1O88551 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn1O88551 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn1O88551 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cldn1O88551 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms