Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr3O88393 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.29□□□□□ -0.12
Tgfbr3O88393 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr3O88393 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Tgfbr3O88393 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.29□□□□□ -0.12
Tgfbr3O88393 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.29□□□□□ -0.12
Tgfbr3O88393 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr3O88393 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.29□□□□□ -0.12
Tgfbr3O88393 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.29□□□□□ -0.12
Tgfbr3O88393 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr3O88393 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.28□□□□□ -0.12
Tgfbr3O88393 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr3O88393 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr3O88393 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.28□□□□□ -0.12
Tgfbr3O88393 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr3O88393 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.28□□□□□ -0.12
Tgfbr3O88393 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr3O88393 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr3O88393 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.28□□□□□ -0.12
Tgfbr3O88393 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.28□□□□□ -0.12
Tgfbr3O88393 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr3O88393 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr3O88393 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr3O88393 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.28□□□□□ -0.12
Tgfbr3O88393 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.28□□□□□ -0.12
Tgfbr3O88393 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.28□□□□□ -0.12
Tgfbr3O88393 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.28□□□□□ -0.12
Tgfbr3O88393 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr3O88393 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr3O88393 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr3O88393 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Tgfbr3O88393 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr3O88393 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr3O88393 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr3O88393 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr3O88393 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.28□□□□□ -0.12
Tgfbr3O88393 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr3O88393 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr3O88393 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr3O88393 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tgfbr3O88393 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tgfbr3O88393 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tgfbr3O88393 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tgfbr3O88393 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Tgfbr3O88393 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Tgfbr3O88393 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tgfbr3O88393 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tgfbr3O88393 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tgfbr3O88393 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tgfbr3O88393 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tgfbr3O88393 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tgfbr3O88393 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tgfbr3O88393 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.27□□□□□ -0.13
Tgfbr3O88393 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.27□□□□□ -0.13
Tgfbr3O88393 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Tgfbr3O88393 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tgfbr3O88393 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tgfbr3O88393 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tgfbr3O88393 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tgfbr3O88393 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.27□□□□□ -0.13
Tgfbr3O88393 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tgfbr3O88393 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tgfbr3O88393 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.27□□□□□ -0.13
Tgfbr3O88393 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tgfbr3O88393 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Tgfbr3O88393 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tgfbr3O88393 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.27□□□□□ -0.13
Tgfbr3O88393 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tgfbr3O88393 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Tgfbr3O88393 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms