Protein–RNA interactions for Protein: O70576

Stag3, Cohesin subunit SA-3, mousemouse

Predictions only

Length 1,240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag3O70576 Gm12151-201ENSMUST00000121374 290 ntBASIC20.67■□□□□ 0.9
Stag3O70576 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Stag3O70576 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Stag3O70576 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Stag3O70576 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Stag3O70576 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC20.67■□□□□ 0.9
Stag3O70576 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stag3O70576 Gm8116-201ENSMUST00000182917 1201 ntBASIC20.67■□□□□ 0.9
Stag3O70576 Gm18049-201ENSMUST00000208909 581 ntBASIC20.67■□□□□ 0.9
Stag3O70576 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC20.67■□□□□ 0.9
Stag3O70576 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC20.67■□□□□ 0.9
Stag3O70576 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stag3O70576 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Stag3O70576 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stag3O70576 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stag3O70576 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Stag3O70576 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Stag3O70576 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Stag3O70576 AC163637.1-201ENSMUST00000215491 1894 ntBASIC20.67■□□□□ 0.9
Stag3O70576 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stag3O70576 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stag3O70576 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stag3O70576 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stag3O70576 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stag3O70576 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC20.66■□□□□ 0.9
Stag3O70576 Prob1-201ENSMUST00000097619 3021 ntBASIC20.66■□□□□ 0.9
Stag3O70576 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC20.66■□□□□ 0.9
Stag3O70576 Rbfox2-208ENSMUST00000227930 1218 ntBASIC20.66■□□□□ 0.9
Stag3O70576 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stag3O70576 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stag3O70576 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stag3O70576 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stag3O70576 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stag3O70576 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Stag3O70576 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Stag3O70576 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Stag3O70576 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.65■□□□□ 0.9
Stag3O70576 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Stag3O70576 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC20.65■□□□□ 0.9
Stag3O70576 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Stag3O70576 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Stag3O70576 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Stag3O70576 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Stag3O70576 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Stag3O70576 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC20.65■□□□□ 0.9
Stag3O70576 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Stag3O70576 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Stag3O70576 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Stag3O70576 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Stag3O70576 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Stag3O70576 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC20.65■□□□□ 0.9
Stag3O70576 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC20.65■□□□□ 0.9
Stag3O70576 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Stag3O70576 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Stag3O70576 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Stag3O70576 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Stag3O70576 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Stag3O70576 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC20.64■□□□□ 0.9
Stag3O70576 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Stag3O70576 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Stag3O70576 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC20.64■□□□□ 0.9
Stag3O70576 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Stag3O70576 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Stag3O70576 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Stag3O70576 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Stag3O70576 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Stag3O70576 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Stag3O70576 Gm12428-201ENSMUST00000119844 727 ntBASIC20.64■□□□□ 0.89
Stag3O70576 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Stag3O70576 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC20.64■□□□□ 0.89
Stag3O70576 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Stag3O70576 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Stag3O70576 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Stag3O70576 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Stag3O70576 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC20.64■□□□□ 0.89
Stag3O70576 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Stag3O70576 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Stag3O70576 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stag3O70576 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stag3O70576 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stag3O70576 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Stag3O70576 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stag3O70576 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Stag3O70576 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stag3O70576 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Stag3O70576 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Stag3O70576 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Stag3O70576 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Stag3O70576 Ighv8-7-201ENSMUST00000194349 297 ntBASIC20.63■□□□□ 0.89
Stag3O70576 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stag3O70576 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stag3O70576 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stag3O70576 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stag3O70576 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stag3O70576 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stag3O70576 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stag3O70576 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stag3O70576 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Stag3O70576 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC20.63■□□□□ 0.89
Stag3O70576 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms