Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.54□□□□□ -0.08
Cacna1bO55017 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.54□□□□□ -0.08
Cacna1bO55017 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.54□□□□□ -0.08
Cacna1bO55017 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.54□□□□□ -0.08
Cacna1bO55017 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1bO55017 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1bO55017 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1bO55017 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cacna1bO55017 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.53□□□□□ -0.08
Cacna1bO55017 Gm16026-204ENSMUST00000162652 683 ntBASIC14.53□□□□□ -0.08
Cacna1bO55017 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1bO55017 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.53□□□□□ -0.08
Cacna1bO55017 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.53□□□□□ -0.08
Cacna1bO55017 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.53□□□□□ -0.08
Cacna1bO55017 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1bO55017 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1bO55017 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1bO55017 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1bO55017 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.53□□□□□ -0.08
Cacna1bO55017 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.53□□□□□ -0.08
Cacna1bO55017 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cacna1bO55017 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.53□□□□□ -0.08
Cacna1bO55017 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cacna1bO55017 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.53□□□□□ -0.08
Cacna1bO55017 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Cacna1bO55017 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1bO55017 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1bO55017 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Cacna1bO55017 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1bO55017 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1bO55017 Gm44344-201ENSMUST00000200287 129 ntBASIC14.53□□□□□ -0.08
Cacna1bO55017 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1bO55017 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.53□□□□□ -0.08
Cacna1bO55017 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1bO55017 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1bO55017 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cacna1bO55017 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cacna1bO55017 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cacna1bO55017 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cacna1bO55017 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cacna1bO55017 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cacna1bO55017 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cacna1bO55017 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Cacna1bO55017 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cacna1bO55017 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.52□□□□□ -0.08
Cacna1bO55017 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cacna1bO55017 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cacna1bO55017 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cacna1bO55017 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.52□□□□□ -0.08
Cacna1bO55017 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
Cacna1bO55017 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cacna1bO55017 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacna1bO55017 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Cacna1bO55017 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacna1bO55017 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacna1bO55017 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.52□□□□□ -0.09
Cacna1bO55017 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacna1bO55017 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.52□□□□□ -0.09
Cacna1bO55017 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacna1bO55017 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cacna1bO55017 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cacna1bO55017 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cacna1bO55017 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1bO55017 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1bO55017 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1bO55017 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1bO55017 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1bO55017 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.51□□□□□ -0.09
Cacna1bO55017 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cacna1bO55017 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1bO55017 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.51□□□□□ -0.09
Cacna1bO55017 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Cacna1bO55017 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1bO55017 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1bO55017 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1bO55017 Gm12859-201ENSMUST00000117834 427 ntBASIC14.51□□□□□ -0.09
Cacna1bO55017 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1bO55017 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1bO55017 Mir7085-201ENSMUST00000184353 66 ntBASIC14.51□□□□□ -0.09
Cacna1bO55017 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.51□□□□□ -0.09
Cacna1bO55017 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1bO55017 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1bO55017 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1bO55017 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Cacna1bO55017 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.51□□□□□ -0.09
Cacna1bO55017 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
Cacna1bO55017 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.51□□□□□ -0.09
Cacna1bO55017 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1bO55017 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.51□□□□□ -0.09
Cacna1bO55017 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1bO55017 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1bO55017 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1bO55017 Syt7-204ENSMUST00000223586 1344 ntBASIC14.51□□□□□ -0.09
Cacna1bO55017 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1bO55017 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.51□□□□□ -0.09
Cacna1bO55017 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1bO55017 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms