Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Stx1aO35526 Carlr-201ENSMUST00000181515 2574 ntBASIC16.98■□□□□ 0.31
Stx1aO35526 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Stx1aO35526 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Stx1aO35526 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.98■□□□□ 0.31
Stx1aO35526 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Stx1aO35526 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Stx1aO35526 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Stx1aO35526 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Stx1aO35526 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.98■□□□□ 0.31
Stx1aO35526 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Stx1aO35526 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stx1aO35526 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stx1aO35526 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stx1aO35526 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.97■□□□□ 0.31
Stx1aO35526 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Stx1aO35526 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Stx1aO35526 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stx1aO35526 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stx1aO35526 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stx1aO35526 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stx1aO35526 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Stx1aO35526 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Stx1aO35526 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Stx1aO35526 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Stx1aO35526 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.97■□□□□ 0.31
Stx1aO35526 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Stx1aO35526 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stx1aO35526 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stx1aO35526 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stx1aO35526 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Stx1aO35526 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stx1aO35526 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Stx1aO35526 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stx1aO35526 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Stx1aO35526 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stx1aO35526 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stx1aO35526 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stx1aO35526 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stx1aO35526 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Stx1aO35526 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.96■□□□□ 0.31
Stx1aO35526 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.96■□□□□ 0.31
Stx1aO35526 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Stx1aO35526 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Stx1aO35526 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Stx1aO35526 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.96■□□□□ 0.31
Stx1aO35526 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Stx1aO35526 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.96■□□□□ 0.31
Stx1aO35526 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Stx1aO35526 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Stx1aO35526 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.96■□□□□ 0.31
Stx1aO35526 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Stx1aO35526 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Stx1aO35526 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Stx1aO35526 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Stx1aO35526 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Stx1aO35526 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.96■□□□□ 0.31
Stx1aO35526 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Stx1aO35526 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Stx1aO35526 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Stx1aO35526 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Stx1aO35526 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Stx1aO35526 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Stx1aO35526 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Stx1aO35526 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Stx1aO35526 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Stx1aO35526 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stx1aO35526 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stx1aO35526 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stx1aO35526 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stx1aO35526 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Stx1aO35526 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stx1aO35526 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stx1aO35526 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stx1aO35526 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stx1aO35526 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.95■□□□□ 0.3
Stx1aO35526 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.95■□□□□ 0.3
Stx1aO35526 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stx1aO35526 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stx1aO35526 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Stx1aO35526 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stx1aO35526 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.95■□□□□ 0.3
Stx1aO35526 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.95■□□□□ 0.3
Stx1aO35526 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stx1aO35526 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stx1aO35526 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stx1aO35526 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.95■□□□□ 0.3
Stx1aO35526 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Stx1aO35526 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Stx1aO35526 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stx1aO35526 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stx1aO35526 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Stx1aO35526 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Stx1aO35526 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Stx1aO35526 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Stx1aO35526 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.94■□□□□ 0.3
Stx1aO35526 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Stx1aO35526 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Stx1aO35526 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Stx1aO35526 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms