Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Gm11543-201ENSMUST00000120758 370 ntBASIC16.35■□□□□ 0.21
Clk2O35491 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Clk2O35491 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Clk2O35491 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Clk2O35491 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Clk2O35491 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.35■□□□□ 0.21
Clk2O35491 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.35■□□□□ 0.21
Clk2O35491 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Clk2O35491 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Clk2O35491 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.35■□□□□ 0.21
Clk2O35491 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.35■□□□□ 0.21
Clk2O35491 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Clk2O35491 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clk2O35491 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Clk2O35491 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Clk2O35491 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clk2O35491 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Clk2O35491 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clk2O35491 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clk2O35491 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clk2O35491 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clk2O35491 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clk2O35491 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clk2O35491 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Clk2O35491 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clk2O35491 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clk2O35491 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Clk2O35491 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clk2O35491 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clk2O35491 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clk2O35491 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clk2O35491 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clk2O35491 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clk2O35491 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clk2O35491 Gm18737-201ENSMUST00000173594 937 ntBASIC16.34■□□□□ 0.21
Clk2O35491 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.34■□□□□ 0.21
Clk2O35491 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clk2O35491 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clk2O35491 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clk2O35491 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clk2O35491 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Clk2O35491 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clk2O35491 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clk2O35491 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clk2O35491 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clk2O35491 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.34■□□□□ 0.21
Clk2O35491 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.33■□□□□ 0.21
Clk2O35491 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clk2O35491 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Clk2O35491 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clk2O35491 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.33■□□□□ 0.21
Clk2O35491 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Clk2O35491 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clk2O35491 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Clk2O35491 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clk2O35491 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.33■□□□□ 0.2
Clk2O35491 Mir449b-201ENSMUST00000104833 80 ntBASIC16.33■□□□□ 0.2
Clk2O35491 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Clk2O35491 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.33■□□□□ 0.2
Clk2O35491 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.33■□□□□ 0.2
Clk2O35491 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.33■□□□□ 0.2
Clk2O35491 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clk2O35491 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.33■□□□□ 0.2
Clk2O35491 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clk2O35491 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.33■□□□□ 0.2
Clk2O35491 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clk2O35491 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.33■□□□□ 0.2
Clk2O35491 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Clk2O35491 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clk2O35491 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clk2O35491 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clk2O35491 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clk2O35491 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clk2O35491 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Clk2O35491 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clk2O35491 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clk2O35491 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clk2O35491 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clk2O35491 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk2O35491 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Clk2O35491 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clk2O35491 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk2O35491 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk2O35491 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk2O35491 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk2O35491 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clk2O35491 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clk2O35491 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk2O35491 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.32■□□□□ 0.2
Clk2O35491 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk2O35491 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.32■□□□□ 0.2
Clk2O35491 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.32■□□□□ 0.2
Clk2O35491 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.32■□□□□ 0.2
Clk2O35491 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.32■□□□□ 0.2
Clk2O35491 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.32■□□□□ 0.2
Clk2O35491 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.32■□□□□ 0.2
Clk2O35491 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk2O35491 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk2O35491 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.32■□□□□ 0.2
Clk2O35491 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms