Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11aO35305 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11aO35305 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11aO35305 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11aO35305 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11aO35305 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.21■□□□□ 0.19
Tnfrsf11aO35305 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Tnfrsf11aO35305 Gm5177-201ENSMUST00000183092 997 ntBASIC16.21■□□□□ 0.19
Tnfrsf11aO35305 Gm45747-201ENSMUST00000212203 999 ntBASIC16.21■□□□□ 0.19
Tnfrsf11aO35305 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.21■□□□□ 0.19
Tnfrsf11aO35305 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11aO35305 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11aO35305 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Tnfrsf11aO35305 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11aO35305 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Tnfrsf11aO35305 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11aO35305 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Tnfrsf11aO35305 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnfrsf11aO35305 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Gm16198-201ENSMUST00000118766 670 ntBASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Carlr-201ENSMUST00000181515 2574 ntBASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tnfrsf11aO35305 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf11aO35305 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf11aO35305 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf11aO35305 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf11aO35305 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf11aO35305 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf11aO35305 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf11aO35305 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Tnfrsf11aO35305 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.19■□□□□ 0.18
Tnfrsf11aO35305 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf11aO35305 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Tnfrsf11aO35305 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Tnfrsf11aO35305 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf11aO35305 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf11aO35305 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.19■□□□□ 0.18
Tnfrsf11aO35305 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.19■□□□□ 0.18
Tnfrsf11aO35305 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.19■□□□□ 0.18
Tnfrsf11aO35305 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Tnfrsf11aO35305 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnfrsf11aO35305 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Tnfrsf11aO35305 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11aO35305 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms