Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13d-3J3QMG8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13d-3J3QMG8 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Gm43767-201ENSMUST00000198933 381 ntBASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13d-3J3QMG8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.23□□□□□ -0.29
Trav13d-3J3QMG8 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms