Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.46■□□□□ 0.07
Pcdh9F8VPK8 Gm24589-201ENSMUST00000116692 94 ntBASIC15.46■□□□□ 0.07
Pcdh9F8VPK8 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.46■□□□□ 0.07
Pcdh9F8VPK8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.46■□□□□ 0.07
Pcdh9F8VPK8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.46■□□□□ 0.07
Pcdh9F8VPK8 Gm43347-201ENSMUST00000200226 580 ntBASIC15.46■□□□□ 0.07
Pcdh9F8VPK8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.46■□□□□ 0.07
Pcdh9F8VPK8 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.46■□□□□ 0.07
Pcdh9F8VPK8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh9F8VPK8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh9F8VPK8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh9F8VPK8 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.46■□□□□ 0.07
Pcdh9F8VPK8 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh9F8VPK8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Pcdh9F8VPK8 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh9F8VPK8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.46■□□□□ 0.06
Pcdh9F8VPK8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh9F8VPK8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Gm4535-201ENSMUST00000182274 558 ntBASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Gm27459-201ENSMUST00000184860 107 ntBASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Gm10355-201ENSMUST00000097146 517 ntBASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh9F8VPK8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Gm43767-201ENSMUST00000198933 381 ntBASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdh9F8VPK8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh9F8VPK8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh9F8VPK8 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.43■□□□□ 0.06
Pcdh9F8VPK8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh9F8VPK8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh9F8VPK8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh9F8VPK8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh9F8VPK8 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh9F8VPK8 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh9F8VPK8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Pcdh9F8VPK8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Pcdh9F8VPK8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdh9F8VPK8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdh9F8VPK8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdh9F8VPK8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh9F8VPK8 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh9F8VPK8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh9F8VPK8 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh9F8VPK8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh9F8VPK8 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh9F8VPK8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh9F8VPK8 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms