Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd3B1AR17 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.74□□□□□ -0.05
Chd3B1AR17 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.74□□□□□ -0.05
Chd3B1AR17 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd3B1AR17 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd3B1AR17 Gm8396-201ENSMUST00000057361 823 ntBASIC14.74□□□□□ -0.05
Chd3B1AR17 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd3B1AR17 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Chd3B1AR17 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chd3B1AR17 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd3B1AR17 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd3B1AR17 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.74□□□□□ -0.05
Chd3B1AR17 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd3B1AR17 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd3B1AR17 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chd3B1AR17 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Chd3B1AR17 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chd3B1AR17 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chd3B1AR17 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.73□□□□□ -0.05
Chd3B1AR17 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.73□□□□□ -0.05
Chd3B1AR17 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.73□□□□□ -0.05
Chd3B1AR17 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chd3B1AR17 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.73□□□□□ -0.05
Chd3B1AR17 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd3B1AR17 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd3B1AR17 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd3B1AR17 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chd3B1AR17 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Chd3B1AR17 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd3B1AR17 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd3B1AR17 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd3B1AR17 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd3B1AR17 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd3B1AR17 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd3B1AR17 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd3B1AR17 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd3B1AR17 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd3B1AR17 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Chd3B1AR17 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd3B1AR17 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd3B1AR17 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
Chd3B1AR17 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd3B1AR17 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.73□□□□□ -0.05
Chd3B1AR17 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd3B1AR17 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd3B1AR17 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.73□□□□□ -0.05
Chd3B1AR17 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd3B1AR17 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd3B1AR17 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Chd3B1AR17 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chd3B1AR17 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chd3B1AR17 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Chd3B1AR17 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Chd3B1AR17 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.72□□□□□ -0.05
Chd3B1AR17 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.72□□□□□ -0.05
Chd3B1AR17 Gm13015-201ENSMUST00000118674 204 ntBASIC14.72□□□□□ -0.05
Chd3B1AR17 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.72□□□□□ -0.05
Chd3B1AR17 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Chd3B1AR17 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.72□□□□□ -0.05
Chd3B1AR17 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Gm25287-201ENSMUST00000103846 110 ntBASIC14.72□□□□□ -0.05
Chd3B1AR17 Gm22918-201ENSMUST00000103855 110 ntBASIC14.72□□□□□ -0.05
Chd3B1AR17 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.72□□□□□ -0.05
Chd3B1AR17 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.72□□□□□ -0.05
Chd3B1AR17 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Gm18057-201ENSMUST00000208220 503 ntBASIC14.72□□□□□ -0.05
Chd3B1AR17 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.72□□□□□ -0.05
Chd3B1AR17 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chd3B1AR17 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.72□□□□□ -0.05
Chd3B1AR17 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.72□□□□□ -0.05
Chd3B1AR17 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.72□□□□□ -0.05
Chd3B1AR17 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chd3B1AR17 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chd3B1AR17 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chd3B1AR17 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms