Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6d-5A0A075B6B9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm15039-201ENSMUST00000118914 875 ntBASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm8344-201ENSMUST00000119813 856 ntBASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-5A0A075B6B9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav6d-5A0A075B6B9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms