Protein–RNA interactions for Protein: Q9R087

Gpc6, Glypican-6, mousemouse

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gpc6Q9R087 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gpc6Q9R087 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gpc6Q9R087 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gpc6Q9R087 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gpc6Q9R087 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gpc6Q9R087 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gpc6Q9R087 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gpc6Q9R087 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gpc6Q9R087 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gpc6Q9R087 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gpc6Q9R087 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gpc6Q9R087 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gpc6Q9R087 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.15□□□□□ -0.14
Gpc6Q9R087 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gpc6Q9R087 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gpc6Q9R087 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gpc6Q9R087 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gpc6Q9R087 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gpc6Q9R087 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Gpc6Q9R087 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Gpc6Q9R087 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Gpc6Q9R087 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gpc6Q9R087 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Gpc6Q9R087 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gpc6Q9R087 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.14□□□□□ -0.15
Gpc6Q9R087 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.14□□□□□ -0.15
Gpc6Q9R087 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.14□□□□□ -0.15
Gpc6Q9R087 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.14□□□□□ -0.15
Gpc6Q9R087 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gpc6Q9R087 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gpc6Q9R087 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.14□□□□□ -0.15
Gpc6Q9R087 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gpc6Q9R087 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gpc6Q9R087 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gpc6Q9R087 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Gpc6Q9R087 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gpc6Q9R087 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gpc6Q9R087 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gpc6Q9R087 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gpc6Q9R087 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Gpc6Q9R087 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.13□□□□□ -0.15
Gpc6Q9R087 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gpc6Q9R087 Mir7071-201ENSMUST00000184847 69 ntBASIC14.13□□□□□ -0.15
Gpc6Q9R087 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gpc6Q9R087 Gm17808-201ENSMUST00000200859 894 ntBASIC14.13□□□□□ -0.15
Gpc6Q9R087 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Gpc6Q9R087 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gpc6Q9R087 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gpc6Q9R087 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gpc6Q9R087 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.13□□□□□ -0.15
Gpc6Q9R087 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gpc6Q9R087 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gpc6Q9R087 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gpc6Q9R087 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Gpc6Q9R087 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gpc6Q9R087 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.12□□□□□ -0.15
Gpc6Q9R087 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gpc6Q9R087 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gpc6Q9R087 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.12□□□□□ -0.15
Gpc6Q9R087 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gpc6Q9R087 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gpc6Q9R087 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gpc6Q9R087 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gpc6Q9R087 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gpc6Q9R087 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gpc6Q9R087 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Gpc6Q9R087 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.12□□□□□ -0.15
Gpc6Q9R087 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gpc6Q9R087 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Gpc6Q9R087 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.12□□□□□ -0.15
Gpc6Q9R087 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.12□□□□□ -0.15
Gpc6Q9R087 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Gpc6Q9R087 Gm29518-201ENSMUST00000190858 372 ntBASIC14.12□□□□□ -0.15
Gpc6Q9R087 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gpc6Q9R087 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms