Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Msh5Q9QUM7 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Msh5Q9QUM7 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Msh5Q9QUM7 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Msh5Q9QUM7 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh5Q9QUM7 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Msh5Q9QUM7 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh5Q9QUM7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.55■□□□□ 0.08
Msh5Q9QUM7 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh5Q9QUM7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Msh5Q9QUM7 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh5Q9QUM7 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh5Q9QUM7 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh5Q9QUM7 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Msh5Q9QUM7 Gm42651-201ENSMUST00000199851 1339 ntBASIC15.55■□□□□ 0.08
Msh5Q9QUM7 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Msh5Q9QUM7 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Msh5Q9QUM7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.55■□□□□ 0.08
Msh5Q9QUM7 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Msh5Q9QUM7 Gm7506-201ENSMUST00000207758 815 ntBASIC15.55■□□□□ 0.08
Msh5Q9QUM7 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Msh5Q9QUM7 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.55■□□□□ 0.08
Msh5Q9QUM7 AC159205.7-201ENSMUST00000225988 692 ntBASIC15.55■□□□□ 0.08
Msh5Q9QUM7 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh5Q9QUM7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh5Q9QUM7 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Msh5Q9QUM7 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh5Q9QUM7 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Msh5Q9QUM7 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh5Q9QUM7 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Gm8825-201ENSMUST00000182565 998 ntBASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Gm4518-201ENSMUST00000182638 718 ntBASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Gm38114-201ENSMUST00000191877 1232 ntBASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Gm6649-201ENSMUST00000199743 1165 ntBASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Msh5Q9QUM7 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh5Q9QUM7 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Msh5Q9QUM7 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Msh5Q9QUM7 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Msh5Q9QUM7 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh5Q9QUM7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
Msh5Q9QUM7 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.53■□□□□ 0.08
Msh5Q9QUM7 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms