Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim42Q9D2H5 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim42Q9D2H5 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.14■□□□□ 0.01
Trim42Q9D2H5 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim42Q9D2H5 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Trim42Q9D2H5 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim42Q9D2H5 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim42Q9D2H5 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
Trim42Q9D2H5 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim42Q9D2H5 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.14■□□□□ 0.01
Trim42Q9D2H5 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim42Q9D2H5 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim42Q9D2H5 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim42Q9D2H5 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim42Q9D2H5 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim42Q9D2H5 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim42Q9D2H5 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim42Q9D2H5 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim42Q9D2H5 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim42Q9D2H5 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.12■□□□□ 0.01
Trim42Q9D2H5 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.12■□□□□ 0.01
Trim42Q9D2H5 Gm42790-201ENSMUST00000201268 969 ntBASIC15.12■□□□□ 0.01
Trim42Q9D2H5 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim42Q9D2H5 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim42Q9D2H5 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim42Q9D2H5 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trim42Q9D2H5 Gm42829-201ENSMUST00000198417 2585 ntBASIC15.12■□□□□ 0.01
Trim42Q9D2H5 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim42Q9D2H5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim42Q9D2H5 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim42Q9D2H5 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim42Q9D2H5 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim42Q9D2H5 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim42Q9D2H5 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim42Q9D2H5 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim42Q9D2H5 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim42Q9D2H5 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim42Q9D2H5 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim42Q9D2H5 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.11■□□□□ 0.01
Trim42Q9D2H5 Gm14722-201ENSMUST00000118943 689 ntBASIC15.11■□□□□ 0.01
Trim42Q9D2H5 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.11■□□□□ 0.01
Trim42Q9D2H5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.11■□□□□ 0.01
Trim42Q9D2H5 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.11■□□□□ 0.01
Trim42Q9D2H5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim42Q9D2H5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim42Q9D2H5 Gm9987-201ENSMUST00000069768 567 ntBASIC15.11■□□□□ 0.01
Trim42Q9D2H5 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim42Q9D2H5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim42Q9D2H5 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim42Q9D2H5 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim42Q9D2H5 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim42Q9D2H5 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim42Q9D2H5 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim42Q9D2H5 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim42Q9D2H5 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim42Q9D2H5 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim42Q9D2H5 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim42Q9D2H5 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim42Q9D2H5 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim42Q9D2H5 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim42Q9D2H5 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Trim42Q9D2H5 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim42Q9D2H5 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trim42Q9D2H5 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim42Q9D2H5 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim42Q9D2H5 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim42Q9D2H5 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim42Q9D2H5 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim42Q9D2H5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms