Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssr1Q9CY50 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssr1Q9CY50 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Ssr1Q9CY50 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssr1Q9CY50 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssr1Q9CY50 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssr1Q9CY50 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ssr1Q9CY50 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Ssr1Q9CY50 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.42■□□□□ 0.22
Ssr1Q9CY50 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssr1Q9CY50 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ssr1Q9CY50 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.42■□□□□ 0.22
Ssr1Q9CY50 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ssr1Q9CY50 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssr1Q9CY50 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssr1Q9CY50 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Ssr1Q9CY50 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssr1Q9CY50 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssr1Q9CY50 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssr1Q9CY50 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssr1Q9CY50 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssr1Q9CY50 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ssr1Q9CY50 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssr1Q9CY50 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Ssr1Q9CY50 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ssr1Q9CY50 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ssr1Q9CY50 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssr1Q9CY50 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssr1Q9CY50 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssr1Q9CY50 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssr1Q9CY50 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ssr1Q9CY50 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssr1Q9CY50 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssr1Q9CY50 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssr1Q9CY50 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssr1Q9CY50 Gm7506-201ENSMUST00000207758 815 ntBASIC16.41■□□□□ 0.22
Ssr1Q9CY50 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssr1Q9CY50 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssr1Q9CY50 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssr1Q9CY50 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssr1Q9CY50 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssr1Q9CY50 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.41■□□□□ 0.22
Ssr1Q9CY50 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssr1Q9CY50 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssr1Q9CY50 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ssr1Q9CY50 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssr1Q9CY50 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ssr1Q9CY50 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssr1Q9CY50 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.4■□□□□ 0.22
Ssr1Q9CY50 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.4■□□□□ 0.22
Ssr1Q9CY50 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssr1Q9CY50 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms