Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Gm25745-201ENSMUST00000174945 133 ntBASIC12.83□□□□□ -0.36
Rpusd4Q9CWX4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpusd4Q9CWX4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpusd4Q9CWX4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpusd4Q9CWX4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpusd4Q9CWX4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpusd4Q9CWX4 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpusd4Q9CWX4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpusd4Q9CWX4 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.83□□□□□ -0.36
Rpusd4Q9CWX4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Rpusd4Q9CWX4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpusd4Q9CWX4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpusd4Q9CWX4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpusd4Q9CWX4 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpusd4Q9CWX4 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Gm12497-201ENSMUST00000138778 237 ntBASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpusd4Q9CWX4 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rpusd4Q9CWX4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms