Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc3Q9CW03 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc3Q9CW03 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.79■□□□□ 0.44
Smc3Q9CW03 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc3Q9CW03 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Smc3Q9CW03 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc3Q9CW03 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc3Q9CW03 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smc3Q9CW03 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc3Q9CW03 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc3Q9CW03 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smc3Q9CW03 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc3Q9CW03 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc3Q9CW03 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc3Q9CW03 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc3Q9CW03 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.78■□□□□ 0.44
Smc3Q9CW03 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc3Q9CW03 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc3Q9CW03 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Smc3Q9CW03 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smc3Q9CW03 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.78■□□□□ 0.44
Smc3Q9CW03 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smc3Q9CW03 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Smc3Q9CW03 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc3Q9CW03 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Smc3Q9CW03 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.78■□□□□ 0.44
Smc3Q9CW03 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Smc3Q9CW03 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.78■□□□□ 0.44
Smc3Q9CW03 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc3Q9CW03 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc3Q9CW03 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smc3Q9CW03 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc3Q9CW03 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc3Q9CW03 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc3Q9CW03 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc3Q9CW03 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Smc3Q9CW03 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc3Q9CW03 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.77■□□□□ 0.44
Smc3Q9CW03 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc3Q9CW03 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc3Q9CW03 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc3Q9CW03 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc3Q9CW03 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Smc3Q9CW03 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc3Q9CW03 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.77■□□□□ 0.44
Smc3Q9CW03 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.77■□□□□ 0.44
Smc3Q9CW03 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Smc3Q9CW03 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smc3Q9CW03 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.77■□□□□ 0.44
Smc3Q9CW03 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.77■□□□□ 0.44
Smc3Q9CW03 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smc3Q9CW03 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Smc3Q9CW03 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.77■□□□□ 0.43
Smc3Q9CW03 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smc3Q9CW03 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smc3Q9CW03 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smc3Q9CW03 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Smc3Q9CW03 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc3Q9CW03 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc3Q9CW03 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc3Q9CW03 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc3Q9CW03 Celf4-206ENSMUST00000224553 1729 ntBASIC17.76■□□□□ 0.43
Smc3Q9CW03 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc3Q9CW03 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.76■□□□□ 0.43
Smc3Q9CW03 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc3Q9CW03 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.76■□□□□ 0.43
Smc3Q9CW03 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc3Q9CW03 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc3Q9CW03 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc3Q9CW03 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc3Q9CW03 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc3Q9CW03 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.76■□□□□ 0.43
Smc3Q9CW03 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Smc3Q9CW03 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smc3Q9CW03 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.76■□□□□ 0.43
Smc3Q9CW03 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.76■□□□□ 0.43
Smc3Q9CW03 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc3Q9CW03 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc3Q9CW03 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Smc3Q9CW03 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc3Q9CW03 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc3Q9CW03 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.76■□□□□ 0.43
Smc3Q9CW03 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smc3Q9CW03 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smc3Q9CW03 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc3Q9CW03 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smc3Q9CW03 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc3Q9CW03 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smc3Q9CW03 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Smc3Q9CW03 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc3Q9CW03 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Smc3Q9CW03 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.75■□□□□ 0.43
Smc3Q9CW03 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.75■□□□□ 0.43
Smc3Q9CW03 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.75■□□□□ 0.43
Smc3Q9CW03 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smc3Q9CW03 Gm17807-201ENSMUST00000186869 298 ntBASIC17.75■□□□□ 0.43
Smc3Q9CW03 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smc3Q9CW03 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Smc3Q9CW03 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Smc3Q9CW03 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms