Protein–RNA interactions for Protein: Q9CVD2

Atxn3, Ataxin-3, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn3Q9CVD2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atxn3Q9CVD2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atxn3Q9CVD2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Atxn3Q9CVD2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 Gm27301-201ENSMUST00000184012 127 ntBASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn3Q9CVD2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Gm20553-201ENSMUST00000204205 844 ntBASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC19.4■□□□□ 0.7
Atxn3Q9CVD2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Atxn3Q9CVD2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Atxn3Q9CVD2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Atxn3Q9CVD2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn3Q9CVD2 Gm10605-202ENSMUST00000183019 3198 ntBASIC19.39■□□□□ 0.69
Atxn3Q9CVD2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn3Q9CVD2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn3Q9CVD2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn3Q9CVD2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.39■□□□□ 0.69
Atxn3Q9CVD2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC19.39■□□□□ 0.69
Atxn3Q9CVD2 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn3Q9CVD2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn3Q9CVD2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn3Q9CVD2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn3Q9CVD2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn3Q9CVD2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn3Q9CVD2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn3Q9CVD2 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn3Q9CVD2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn3Q9CVD2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn3Q9CVD2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Atxn3Q9CVD2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atxn3Q9CVD2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atxn3Q9CVD2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC19.38■□□□□ 0.69
Atxn3Q9CVD2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Atxn3Q9CVD2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atxn3Q9CVD2 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atxn3Q9CVD2 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Atxn3Q9CVD2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atxn3Q9CVD2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atxn3Q9CVD2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC19.38■□□□□ 0.69
Atxn3Q9CVD2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Atxn3Q9CVD2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC19.38■□□□□ 0.69
Atxn3Q9CVD2 Sybu-209ENSMUST00000228639 4113 ntBASIC19.38■□□□□ 0.69
Atxn3Q9CVD2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atxn3Q9CVD2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atxn3Q9CVD2 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC19.38■□□□□ 0.69
Atxn3Q9CVD2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atxn3Q9CVD2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Atxn3Q9CVD2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atxn3Q9CVD2 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC19.37■□□□□ 0.69
Atxn3Q9CVD2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atxn3Q9CVD2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atxn3Q9CVD2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atxn3Q9CVD2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC19.37■□□□□ 0.69
Atxn3Q9CVD2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms