Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdk9Q99J95 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Cdk9Q99J95 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdk9Q99J95 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk9Q99J95 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk9Q99J95 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk9Q99J95 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk9Q99J95 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk9Q99J95 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk9Q99J95 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk9Q99J95 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cdk9Q99J95 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk9Q99J95 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk9Q99J95 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk9Q99J95 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.26■□□□□ 0.03
Cdk9Q99J95 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk9Q99J95 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk9Q99J95 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk9Q99J95 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk9Q99J95 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk9Q99J95 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk9Q99J95 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk9Q99J95 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.26■□□□□ 0.03
Cdk9Q99J95 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk9Q99J95 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Cdk9Q99J95 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk9Q99J95 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk9Q99J95 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdk9Q99J95 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.26■□□□□ 0.03
Cdk9Q99J95 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk9Q99J95 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdk9Q99J95 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.24■□□□□ 0.03
Cdk9Q99J95 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.24■□□□□ 0.03
Cdk9Q99J95 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk9Q99J95 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cdk9Q99J95 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Gm11355-201ENSMUST00000121120 306 ntBASIC15.24■□□□□ 0.03
Cdk9Q99J95 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.24■□□□□ 0.03
Cdk9Q99J95 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.24■□□□□ 0.03
Cdk9Q99J95 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.24■□□□□ 0.03
Cdk9Q99J95 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk9Q99J95 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk9Q99J95 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk9Q99J95 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk9Q99J95 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk9Q99J95 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cdk9Q99J95 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk9Q99J95 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms